Hi everyone,
I aways get atoms overlapping after initial minimization. The atoms in the intial geometry are not overlapping.How can I solve the problem?
Thanks,
Wu Minbo
data.casglass1 (26.6 KB)
in.casglass (1.8 KB)
Hi everyone,
I aways get atoms overlapping after initial minimization. The atoms in the intial geometry are not overlapping.How can I solve the problem?
Thanks,
Wu Minbo
data.casglass1 (26.6 KB)
in.casglass (1.8 KB)
Dear Wu Minbo,
Do you want to remove overlapping? If this is the case, I use dpd potential or the soft cosine potential to gradually remove overlapping atoms during initial equilibration. I typically simulate this under the nve ensemble instead of nvt or npt ensemble.
Sincerely,
Masato Koizumi