I use
dump mydmp all custom 1000 dump.md.lammpstrj id type x y z fx fy fz
To get a dump file that looks like
ITEM: TIMESTEP
0
ITEM: NUMBER OF ATOMS
1150
ITEM: BOX BOUNDS pp pp pp
-2.0000000000000000e+01 2.0000000000000000e+01
-2.0000000000000000e+01 2.0000000000000000e+01
-2.0000000000000000e+01 2.0000000000000000e+01
ITEM: ATOMS id type x y z fx fy fz
970 1 4.46152 -19.8825 -19.4972 75.0494 -51.9012 106.525
798 1 1.07741 -17.5784 -19.3535 -18.5085 -58.8937 -37.7941
...
I would like to include the total energy of the system (i.e. pe
as can printed to the terminal by thermo
) in the dump file, to get something like
ITEM: TIMESTEP
0
ITEM: POTENTIAL ENERGY <-------------------- new
1234.5678
ITEM: NUMBER OF ATOMS
1150
ITEM: BOX BOUNDS pp pp pp
-2.0000000000000000e+01 2.0000000000000000e+01
-2.0000000000000000e+01 2.0000000000000000e+01
-2.0000000000000000e+01 2.0000000000000000e+01
ITEM: ATOMS id type x y z fx fy fz
970 1 4.46152 -19.8825 -19.4972 75.0494 -51.9012 106.525
798 1 1.07741 -17.5784 -19.3535 -18.5085 -58.8937 -37.7941
...
I feel like this is a very basic use case, but from the documentation I only understand how to write per-atom properties with dump
and system properties with other commands to different files…