Is there a simple way to featureize a dataframe with all of the possible featurizers?

Matminer
1

Hi,

Great project!! Is there a simple way to featurize a dataframe of compounds with all of the possible featurizers? Thank you!!

Sincerely,

tom

2

Hi thomas,

We are actually working on a separate package with this capability, which is coming soon.

In the meantime, I’d recommend using a MultipleFeaturizer object to apply a set of featurizers to your dataframe at once. When you make the MultipleFeaturizer object, you should pass it the list of featurizers you want to apply as well as the argument iterate_over_entries=True (this will give you a separate progress bar for each featurizer).

For browsing featurizers, check out the auto-generated list of featurizers here: https://hackingmaterials.github.io/matminer/featurizer_summary.html

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On Sunday, October 21, 2018 at 7:07:56 AM UTC-7, thomas heiman wrote:

Hi,

Great project!! Is there a simple way to featurize a dataframe of compounds with all of the possible featurizers? Thank you!!

Sincerely,

tom

3

Thank you!!

···

On Sunday, October 21, 2018 at 11:27:51 AM UTC-4, Alex Dunn wrote:

Hi thomas,

We are actually working on a separate package with this capability, which is coming soon.

In the meantime, I’d recommend using a MultipleFeaturizer object to apply a set of featurizers to your dataframe at once. When you make the MultipleFeaturizer object, you should pass it the list of featurizers you want to apply as well as the argument iterate_over_entries=True (this will give you a separate progress bar for each featurizer).

For browsing featurizers, check out the auto-generated list of featurizers here: https://hackingmaterials.github.io/matminer/featurizer_summary.html

On Sunday, October 21, 2018 at 7:07:56 AM UTC-7, thomas heiman wrote:

Hi,

Great project!! Is there a simple way to featurize a dataframe of compounds with all of the possible featurizers? Thank you!!

Sincerely,

tom