Lammps giving error, 'finalize was not called on proc0'

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1

I am getting the following error message when I am running my simulation. The code is same as given here-
https://icme.hpc.msstate.edu/mediawiki/index.php/MD_PE_deformation
and the code for generation of my 30 chains, 1000 momomers each system is https://icme.hpc.msstate.edu/mediawiki/index.php/Amorphous_Polymer_Generator#cite_note-Hos2010-0

My command to run was ‘mpirun -np 8 lammps-daily < input.lmp’. (I am on an ubuntu, 8-core i-7 machine)

2

your actual error is: ERROR on proc X: Substitution for illegal variable (…/input.cpp:450)

check the LAMMPS error docs: http://lammps.sandia.gov/doc/Section_errors.html for what it means. seems as if your input script was flawed.

best,

nikita