Topo tools plug in guesses angles and dihedrals based on bond topology. You may not find parameters for all the dihedrals that are guessed by topo tools. Hence the discrepancy.
Dr. Axel might want to add.
Arun
Topo tools plug in guesses angles and dihedrals based on bond topology. You may not find parameters for all the dihedrals that are guessed by topo tools. Hence the discrepancy.
Dr. Axel might want to add.
Arun