Shell command

Dear Users,

I want to run my program on a cluster on 16 processors and I have used the “Shell” command in my program. I am also using “fix colvars”. I got the following error:

ERROR on proc 0: Restrain atoms 36 25 28 30 missing on proc 0 at step 0 (…/fix_restrain.cpp:459)
ERROR on proc 4: Restrain atoms 36 25 28 30 missing on proc 4 at step 0 (…/fix_restrain.cpp:459)
ERROR on proc 12: Restrain atoms 36 25 28 30 missing on proc 12 at step 0 (…/fix_restrain.cpp:459)
ERROR on proc 8: Restrain atoms 36 25 28 30 missing on proc 8 at step 0 (…/fix_restrain.cpp:459)
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 12
ERROR on proc 5: Restrain atoms 8356 8345 8348 8350 missing on proc 5 at step 0 (…/fix_restrain.cpp:459)

Anyone knows what can I do?

Thanks,

Neda

Dear Users,
I want to run my program on a cluster on 16 processors and I have used the
"Shell" command in my program. I am also using "fix colvars". I got the
following error:

ERROR on proc 0: Restrain atoms 36 25 28 30 missing on proc 0 at step 0
(../fix_restrain.cpp:459)
ERROR on proc 4: Restrain atoms 36 25 28 30 missing on proc 4 at step 0
(../fix_restrain.cpp:459)
ERROR on proc 12: Restrain atoms 36 25 28 30 missing on proc 12 at step 0
(../fix_restrain.cpp:459)
ERROR on proc 8: Restrain atoms 36 25 28 30 missing on proc 8 at step 0
(../fix_restrain.cpp:459)
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 12
ERROR on proc 5: Restrain atoms 8356 8345 8348 8350 missing on proc 5 at
step 0 (../fix_restrain.cpp:459)

Anyone knows what can I do?

​this error has *very obviously* nothing to do with either the shell
command or fix colvars.

http://lammps.sandia.gov/doc/Section_errors.html

axel.