units real atom_style charge pair_style lj/cut/coul/long 10.0 read_data system.data pair_coeff 1 1 31.82 2.673 pair_coeff 1 2 35.86 2.165 pair_coeff 2 2 8.97 3.091 pair_modify table 0 fix qeq all qeq/slater 1 20.0 1.0e-6 200 param.qeq kspace_style pppm 1.0e-8 neighbor 3.0 bin neigh_modify delay 0 check yes every 1 one 10000 dump xyz all custom 100 system.lammpstrj element x y z id ix iy iz q dump_modify xyz element Mo S dump_modify xyz sort id group mo type 1 compute chargemo mo property/atom q compute qmo mo reduce ave c_chargemo group s type 2 compute charges s property/atom q compute qs s reduce ave c_charges thermo 1 thermo_style custom time lx ly lz pe evdwl ecoul elong c_qmo c_qs fix f1 all box/relax x 1.0 y 1.0 z 1.0 nreset 100 min_style cg minimize 0.0 1.0e-5 100000 1000000