grep: angle_*.h: No such file or directory grep: dihedral_*.h: No such file or directory grep: improper_*.h: No such file or directory make[1]: Entering directory `/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi' CC -fastsse -DLAMMPS_GZIP -DMPICH_SKIP_MPICXX -c force.cpp CC -fastsse -DLAMMPS_GZIP -DMPICH_SKIP_MPICXX -c lammps.cpp CC -O angle.o atom.o atom_map.o atom_vec_atomic.o atom_vec_charge.o atom_vec.o atom_vec_ellipsoid.o atom_vec_hybrid.o atom_vec_line.o atom_vec_sphere.o atom_vec_tri.o balance.o bond.o bond_hybrid.o change_box.o comm.o compute_angle_local.o compute_atom_molecule.o compute_bond_local.o compute_centro_atom.o compute_cluster_atom.o compute_cna_atom.o compute_com.o compute_com_molecule.o compute_contact_atom.o compute_coord_atom.o compute.o compute_dihedral_local.o compute_displace_atom.o compute_erotate_sphere_atom.o compute_erotate_sphere.o compute_group_group.o compute_gyration.o compute_gyration_molecule.o compute_heat_flux.o compute_improper_local.o compute_ke_atom.o compute_ke.o compute_msd.o compute_msd_molecule.o compute_pair.o compute_pair_local.o compute_pe_atom.o compute_pe.o compute_pressure.o compute_property_atom.o compute_property_local.o compute_property_molecule.o compute_rdf.o compute_reduce.o compute_reduce_region.o compute_slice.o compute_stress_atom.o compute_temp_com.o compute_temp.o compute_temp_deform.o compute_temp_partial.o compute_temp_profile.o compute_temp_ramp.o compute_temp_region.o compute_temp_sphere.o compute_ti.o create_atoms.o create_box.o delete_atoms.o delete_bonds.o dihedral.o displace_atoms.o domain.o dump_atom.o dump_cfg.o dump.o dump_custom.o dump_dcd.o dump_image.o dump_local.o dump_xyz.o error.o finish.o fix_adapt.o fix_addforce.o fix_ave_atom.o fix_ave_correlate.o fix_aveforce.o fix_ave_histo.o fix_ave_spatial.o fix_ave_time.o fix_balance.o fix_box_relax.o fix.o fix_deform.o fix_deposit.o fix_drag.o fix_dt_reset.o fix_efield.o fix_enforce2d.o fix_evaporate.o fix_external.o fix_gravity.o fix_heat.o fix_indent.o fix_langevin.o fix_lineforce.o fix_minimize.o fix_momentum.o fix_move.o fix_nh.o fix_nh_sphere.o fix_nph.o fix_nph_sphere.o fix_npt.o fix_npt_sphere.o fix_nve.o fix_nve_limit.o fix_nve_noforce.o fix_nve_sphere.o fix_nvt.o fix_nvt_sllod.o fix_nvt_sphere.o fix_orient_fcc.o fix_planeforce.o fix_press_berendsen.o fix_print.o fix_read_restart.o fix_recenter.o fix_respa.o fix_restrain.o fix_setforce.o fix_shake.o fix_shear_history.o fix_spring.o fix_spring_rg.o fix_spring_self.o fix_store_force.o fix_store_state.o fix_temp_berendsen.o fix_temp_rescale.o fix_thermal_conductivity.o fix_tmd.o fix_ttm.o fix_viscosity.o fix_viscous.o fix_wall.o fix_wall_harmonic.o fix_wall_lj126.o fix_wall_lj93.o fix_wall_reflect.o fix_wall_region.o force.o group.o image.o improper.o input.o integrate.o irregular.o kspace.o lammps.o lattice.o library.o main.o math_extra.o memory.o min_cg.o min.o min_fire.o min_hftn.o minimize.o min_linesearch.o min_quickmin.o min_sd.o modify.o neigh_bond.o neighbor.o neigh_derive.o neigh_full.o neigh_gran.o neigh_half_bin.o neigh_half_multi.o neigh_half_nsq.o neigh_list.o neigh_request.o neigh_respa.o neigh_stencil.o output.o pair_beck.o pair_born_coul_wolf.o pair_born.o pair_buck_coul_cut.o pair_buck.o pair_coul_cut.o pair_coul_debye.o pair_coul_wolf.o pair.o pair_dpd.o pair_dpd_tstat.o pair_gauss.o pair_hybrid.o pair_hybrid_overlay.o pair_lj96_cut.o pair_lj_cubic.o pair_lj_cut_coul_cut.o pair_lj_cut_coul_debye.o pair_lj_cut.o pair_lj_expand.o pair_lj_gromacs_coul_gromacs.o pair_lj_gromacs.o pair_lj_smooth.o pair_lj_smooth_linear.o pair_morse.o pair_soft.o pair_table.o pair_yukawa.o procmap.o random_mars.o random_park.o read_data.o read_dump.o reader.o reader_native.o reader_xyz.o read_restart.o region_block.o region_cone.o region.o region_cylinder.o region_intersect.o region_plane.o region_prism.o region_sphere.o region_union.o replicate.o rerun.o respa.o run.o set.o special.o thermo.o timer.o universe.o update.o variable.o velocity.o verlet.o write_restart.o -o ../lmp_kraken_pgi angle.o: In function `ev_setup__Q2_9LAMMPS_NS5AngleFiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./angle.cpp:88: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./angle.cpp:95: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./angle.cpp:95: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' angle.o: In function `create__tm__2_d__Q2_9LAMMPS_NS6MemoryFRPZ1ZiPCc_PZ1Z': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./memory.h:46: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' angle.o: In function `create__tm__2_d__Q2_9LAMMPS_NS6MemoryFRPPZ1ZiT2PCc_PPZ1Z': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./memory.h:116: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' angle.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./memory.h:116: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow comm.o: In function `grow_send__Q2_9LAMMPS_NS4CommFiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1376: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1378: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' comm.o: In function `LAMMPS_NS::Comm::grow_recv( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1389: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' comm.o: In function `grow_list__Q2_9LAMMPS_NS4CommFiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1401: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1401: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' comm.o: In function `LAMMPS_NS::Comm::grow_swap( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1417: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1419: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1419: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1420: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' comm.o: In function `LAMMPS_NS::Comm::allocate_swap( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1433: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1433: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1433: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1433: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' comm.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./comm.cpp:1433: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow compute.o: In function `LAMMPS_NS::Compute::addstep( (long))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute.cpp:170: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' compute.o: In function `molecules_in_group__Q2_9LAMMPS_NS7ComputeFRiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute.cpp:254: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute.cpp:258: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' compute.o: In function `grow__tm__2_l__Q2_9LAMMPS_NS6MemoryFRPZ1ZiPCc_PZ1Z': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./memory.h:61: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./memory.h:63: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' compute.o: In function `create__tm__2_l__Q2_9LAMMPS_NS6MemoryFRPZ1ZiPCc_PZ1Z': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./memory.h:46: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' compute_dihedral_local.o: In function `LAMMPS_NS::ComputeDihedralLocal::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute_dihedral_local.cpp:215: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute_dihedral_local.cpp:220: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute_dihedral_local.cpp:220: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' compute_dihedral_local.o: In function `LAMMPS_NS::ComputeDihedralLocal::compute_local( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute_dihedral_local.cpp:215: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' compute_dihedral_local.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./compute_dihedral_local.cpp:220: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow fix_adapt.o: In function `LAMMPS_NS::FixAdapt::setup_pre_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_adapt.cpp:337: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_adapt.o: In function `LAMMPS_NS::FixAdapt::pre_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_adapt.cpp:337: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_adapt.o: In function `LAMMPS_NS::FixAdapt::change_settings( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_adapt.cpp:338: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_addforce.o: In function `LAMMPS_NS::FixAddForce::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_addforce.cpp:290: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_ave_atom.o: In function `LAMMPS_NS::FixAveAtom::__ct( (LAMMPS_NS::LAMMPS *, int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_atom.cpp:195: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_atom.o: In function `LAMMPS_NS::FixAveAtom::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_atom.cpp:446: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_atom.o: In function `LAMMPS_NS::FixAveAtom::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_atom.cpp:362: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_atom.cpp:367: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_ave_correlate.o: In function `LAMMPS_NS::FixAveCorrelate::__ct( (LAMMPS_NS::LAMMPS *, int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_correlate.cpp:304: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_correlate.o: In function `LAMMPS_NS::FixAveCorrelate::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_correlate.cpp:599: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_correlate.o: In function `LAMMPS_NS::FixAveCorrelate::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_correlate.cpp:451: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_aveforce.o: In function `LAMMPS_NS::FixAveForce::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_aveforce.cpp:227: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_ave_histo.o: In function `LAMMPS_NS::FixAveHisto::__ct( (LAMMPS_NS::LAMMPS *, int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_histo.cpp:483: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_histo.o: In function `LAMMPS_NS::FixAveHisto::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_histo.cpp:1001: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_histo.o: In function `LAMMPS_NS::FixAveHisto::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_histo.cpp:710: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_histo.cpp:715: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_ave_spatial.o: In function `LAMMPS_NS::FixAveSpatial::__ct( (LAMMPS_NS::LAMMPS *, int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_spatial.cpp:390: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_spatial.o: In function `LAMMPS_NS::FixAveSpatial::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_spatial.cpp:1274: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_spatial.o: In function `LAMMPS_NS::FixAveSpatial::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_spatial.cpp:710: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_spatial.cpp:715: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_ave_time.o: In function `LAMMPS_NS::FixAveTime::__ct( (LAMMPS_NS::LAMMPS *, int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_time.cpp:426: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_time.o: In function `LAMMPS_NS::FixAveTime::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_time.cpp:935: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_ave_time.o: In function `invoke_scalar__Q2_9LAMMPS_NS10FixAveTimeFL': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_time.cpp:582: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_time.cpp:587: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_ave_time.o: In function `invoke_vector__Q2_9LAMMPS_NS10FixAveTimeFL': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_time.cpp:716: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ave_time.cpp:721: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_balance.o: In function `LAMMPS_NS::FixBalance::setup_pre_exchange( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_balance.cpp:224: undefined reference to `dumpout__Q2_9LAMMPS_NS7BalanceFLP8_IO_FILE' fix_balance.o: In function `LAMMPS_NS::FixBalance::pre_exchange( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_balance.cpp:224: undefined reference to `dumpout__Q2_9LAMMPS_NS7BalanceFLP8_IO_FILE' fix_balance.o: In function `LAMMPS_NS::FixBalance::rebalance( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_balance.cpp:224: undefined reference to `dumpout__Q2_9LAMMPS_NS7BalanceFLP8_IO_FILE' fix_box_relax.o: In function `LAMMPS_NS::FixBoxRelax::min_energy( (double *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_box_relax.cpp:746: undefined reference to `addstep__Q2_9LAMMPS_NS7ComputeFL' fix.o: In function `LAMMPS_NS::Fix::v_setup( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix.cpp:130: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix.cpp:130: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_deform.o: In function `LAMMPS_NS::FixDeform::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_deform.cpp:835: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_efield.o: In function `LAMMPS_NS::FixEfield::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_efield.cpp:197: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_external.o: In function `LAMMPS_NS::FixExternal::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_external.cpp:82: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_external.cpp:82: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_gravity.o: In function `LAMMPS_NS::FixGravity::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_gravity.cpp:256: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_indent.o: In function `LAMMPS_NS::FixIndent::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_indent.cpp:352: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_langevin.o: In function `LAMMPS_NS::FixLangevin::post_force_no_tally( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_langevin.cpp:317: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_langevin.o: In function `LAMMPS_NS::FixLangevin::post_force_tally( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_langevin.cpp:512: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_move.o: In function `LAMMPS_NS::FixMove::initial_integrate( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_move.cpp:615: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_nh.o: In function `LAMMPS_NS::FixNH::setup( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_nh.cpp:975: undefined reference to `addstep__Q2_9LAMMPS_NS7ComputeFL' fix_nh.o: In function `LAMMPS_NS::FixNH::initial_integrate( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_nh.cpp:975: undefined reference to `addstep__Q2_9LAMMPS_NS7ComputeFL' fix_nh.o: In function `LAMMPS_NS::FixNH::final_integrate( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_nh.cpp:975: undefined reference to `addstep__Q2_9LAMMPS_NS7ComputeFL' fix_nh.o: In function `initial_integrate_respa__Q2_9LAMMPS_NS5FixNHFiN21': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_nh.cpp:975: undefined reference to `addstep__Q2_9LAMMPS_NS7ComputeFL' fix_press_berendsen.o: In function `LAMMPS_NS::FixPressBerendsen::setup( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_press_berendsen.cpp:341: undefined reference to `addstep__Q2_9LAMMPS_NS7ComputeFL' fix_press_berendsen.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_press_berendsen.cpp:379: more undefined references to `addstep__Q2_9LAMMPS_NS7ComputeFL' follow fix_print.o: In function `LAMMPS_NS::FixPrint::__ct( (LAMMPS_NS::LAMMPS *, int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_print.cpp:96: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' fix_print.o: In function `LAMMPS_NS::FixPrint::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_print.cpp:128: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_setforce.o: In function `LAMMPS_NS::FixSetForce::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_setforce.cpp:262: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_shake.o: In function `LAMMPS_NS::FixShake::pre_neighbor( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:443: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_shake.o: In function `LAMMPS_NS::FixShake::grow_arrays( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2241: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2241: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2242: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2242: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2243: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2243: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2245: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:2245: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_shake.o: In function `LAMMPS_NS::FixShake::find_clusters( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:657: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:657: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:657: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_shake.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shake.cpp:657: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow fix_shear_history.o: In function `LAMMPS_NS::FixShearHistory::grow_arrays( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:222: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:223: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:223: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:224: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:224: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:224: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:272: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:272: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_shear_history.cpp:272: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' fix_store_force.o: In function `LAMMPS_NS::FixStoreForce::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_store_force.cpp:102: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_store_force.cpp:102: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_store_state.o: In function `LAMMPS_NS::FixStoreState::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_store_state.cpp:451: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_temp_berendsen.o: In function `LAMMPS_NS::FixTempBerendsen::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_temp_berendsen.cpp:156: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_temp_rescale.o: In function `LAMMPS_NS::FixTempRescale::end_of_step( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_temp_rescale.cpp:153: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_tmd.o: In function `LAMMPS_NS::FixTMD::grow_arrays( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:355: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:355: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:356: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:356: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_tmd.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' fix_ttm.o: In function `LAMMPS_NS::FixTTM::write_restart( (_IO_FILE *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ttm.cpp:596: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' fix_ttm.o: In function `LAMMPS_NS::FixTTM::grow_arrays( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ttm.cpp:555: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ttm.cpp:555: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ttm.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_ttm.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' fix_wall.o: In function `LAMMPS_NS::FixWall::post_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_wall.cpp:266: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' fix_wall_reflect.o: In function `LAMMPS_NS::FixWallReflect::post_integrate( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./fix_wall_reflect.cpp:227: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' improper.o: In function `ev_setup__Q2_9LAMMPS_NS8ImproperFiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./improper.cpp:84: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./improper.cpp:91: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./improper.cpp:91: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' integrate.o: In function `ev_set__Q2_9LAMMPS_NS9IntegrateFL': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./integrate.cpp:118: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./integrate.cpp:124: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./integrate.cpp:134: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./integrate.cpp:140: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' irregular.o: In function `LAMMPS_NS::Irregular::__ct( (LAMMPS_NS::LAMMPS *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:34: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:34: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' irregular.o: In function `LAMMPS_NS::Irregular::migrate_atoms( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:63: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' irregular.o: In function `LAMMPS_NS::Irregular::create_data( (int, int *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:479: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' irregular.o: In function `exchange_data__Q2_9LAMMPS_NS9IrregularFPciT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:637: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' irregular.o: In function `create_atom__Q2_9LAMMPS_NS9IrregularFiPiT2': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:258: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' irregular.o: In function `exchange_atom__Q2_9LAMMPS_NS9IrregularFPdPiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:415: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' irregular.o: In function `grow_send__Q2_9LAMMPS_NS9IrregularFiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:778: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:778: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:780: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' irregular.o: In function `LAMMPS_NS::Irregular::grow_recv( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./irregular.cpp:791: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' library.o: In function `lammps_gather_atoms': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./library.cpp:412: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./library.cpp:438: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' min_cg.o: In function `LAMMPS_NS::MinCG::iterate( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min_cg.cpp:177: undefined reference to `LAMMPS_NS::Output::write( (long))' min.o: In function `LAMMPS_NS::Min::setup( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:681: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:686: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:696: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:702: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' min.o: In function `LAMMPS_NS::Min::setup_minimal( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:681: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' min.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:686: more undefined references to `matchstep__Q2_9LAMMPS_NS7ComputeFL' follow min.o: In function `LAMMPS_NS::Min::run( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:410: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' min.o: In function `LAMMPS_NS::Min::energy_force( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:681: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:686: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:696: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:702: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' min.o: In function `ev_set__Q2_9LAMMPS_NS3MinFL': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:681: undefined reference to `matchstep__Q2_9LAMMPS_NS7ComputeFL' min.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min.cpp:686: more undefined references to `matchstep__Q2_9LAMMPS_NS7ComputeFL' follow min_fire.o: In function `LAMMPS_NS::MinFire::iterate( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min_fire.cpp:265: undefined reference to `LAMMPS_NS::Output::write( (long))' min_hftn.o: In function `execute_hftn___Q2_9LAMMPS_NS7MinHFTNFbdT2RdT4': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min_hftn.cpp:536: undefined reference to `LAMMPS_NS::Output::write( (long))' min_quickmin.o: In function `LAMMPS_NS::MinQuickMin::iterate( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min_quickmin.cpp:232: undefined reference to `LAMMPS_NS::Output::write( (long))' min_sd.o: In function `LAMMPS_NS::MinSD::iterate( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./min_sd.cpp:101: undefined reference to `LAMMPS_NS::Output::write( (long))' modify.o: In function `LAMMPS_NS::Modify::add_fix( (int, char **, char *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./modify.cpp:629: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./modify.cpp:63: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' modify.o: In function `LAMMPS_NS::Modify::add_compute( (int, char **, char *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./modify.cpp:774: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::bond_all( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:61: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:61: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::bond_partial( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:101: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:101: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::angle_all( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:147: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:147: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::angle_partial( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:195: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:195: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::dihedral_all( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:247: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:247: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::dihedral_partial( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:301: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:301: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::improper_all( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:354: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:354: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_bond.o: In function `LAMMPS_NS::Neighbor::improper_partial( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:408: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:408: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_bond.cpp:143: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neighbor.o: In function `LAMMPS_NS::Neighbor::init( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:228: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:228: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:122: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:122: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:352: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neighbor.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:352: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow neighbor.o: In function `LAMMPS_NS::Neighbor::request( (void *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:782: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neighbor.o: In function `LAMMPS_NS::Neighbor::setup_bins( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1558: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neighbor.o: In function `LAMMPS_NS::Neighbor::build( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1282: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1282: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1325: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neighbor.o: In function `LAMMPS_NS::Neighbor::build_one( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1376: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neighbor.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1687: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow neighbor.o: In function `LAMMPS_NS::Neighbor::modify_params( (int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1687: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1688: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1688: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1699: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1699: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1700: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1700: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1716: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neighbor.cpp:1716: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' neigh_list.o: In function `LAMMPS_NS::NeighList::grow( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:116: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:116: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:116: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:129: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neigh_list.o: In function `stencil_allocate__Q2_9LAMMPS_NS9NeighListFiT1': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:144: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neigh_list.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:149: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow neigh_list.o: In function `LAMMPS_NS::NeighList::add_pages( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:185: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:190: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:194: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:196: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' neigh_list.o: In function `LAMMPS_NS::NeighList::copy_skip_info( (int *, int **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:209: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./neigh_list.cpp:209: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' output.o: In function `LAMMPS_NS::Output::setup( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:207: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:208: undefined reference to `addstep_compute_all__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:274: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' output.o: In function `write__Q2_9LAMMPS_NS6OutputFL': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:313: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:344: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:365: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:387: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' output.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./output.cpp:463: more undefined references to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' follow procmap.o: In function `onelevel_grid__Q2_9LAMMPS_NS7ProcMapFiPiT2N21N22': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./procmap.cpp:741: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./procmap.cpp:741: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' procmap.o: In function `twolevel_grid__Q2_9LAMMPS_NS7ProcMapFiPiT2T1N22N21N22': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./procmap.cpp:741: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./procmap.cpp:741: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./procmap.cpp:741: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' procmap.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./procmap.cpp:741: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow read_data.o: In function `LAMMPS_NS::ReadData::command( (int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:63: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:64: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:64: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' read_data.o: In function `scan__Q2_9LAMMPS_NS8ReadDataFRiN31': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1141: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' read_data.o: In function `reallocate__Q2_9LAMMPS_NS8ReadDataFPPiiT2': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1433: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1433: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' read_data.o: In function `LAMMPS_NS::ReadData::parse_coeffs( (char *, char const *, int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1552: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' read_data.o: In function `LAMMPS_NS::ReadData::paircoeffs( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1550: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' read_data.o: In function `LAMMPS_NS::ReadData::bondcoeffs( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1550: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' read_data.o: In function `LAMMPS_NS::ReadData::anglecoeffs( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1550: undefined reference to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' read_data.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_data.cpp:1550: more undefined references to `LAMMPS_NS::Memory::srealloc( (void *, long, char const *))' follow read_dump.o: In function `LAMMPS_NS::ReadDump::command( (int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_dump.cpp:385: undefined reference to `LAMMPS_NS::Update::reset_timestep( (long))' read_dump.o: In function `LAMMPS_NS::ReadDump::setup_reader( (int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_dump.cpp:183: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_dump.cpp:183: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' read_dump.o: In function `LAMMPS_NS::ReadDump::atoms( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_dump.cpp:419: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_dump.cpp:421: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_dump.cpp:421: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' read_restart.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./read_restart.cpp:184: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow rerun.o: In function `LAMMPS_NS::Rerun::command( (int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./rerun.cpp:154: undefined reference to `LAMMPS_NS::Update::reset_timestep( (long))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./rerun.cpp:161: undefined reference to `LAMMPS_NS::Output::write( (long))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./rerun.cpp:171: undefined reference to `LAMMPS_NS::Output::write( (long))' run.o: In function `LAMMPS_NS::Run::command( (int, char **))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./run.cpp:227: undefined reference to `addstep_compute__Q2_9LAMMPS_NS6ModifyFL' special.o: In function `LAMMPS_NS::Special::build( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./special.cpp:152: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./special.cpp:152: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./special.cpp:303: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./special.cpp:303: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./special.cpp:470: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' special.o:/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./special.cpp:470: more undefined references to `LAMMPS_NS::Memory::smalloc( (long, char const *))' follow verlet.o: In function `LAMMPS_NS::Verlet::setup( (void))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./verlet.cpp:114: undefined reference to `LAMMPS_NS::Integrate::ev_set( (long))' verlet.o: In function `LAMMPS_NS::Verlet::setup_minimal( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./verlet.cpp:178: undefined reference to `LAMMPS_NS::Integrate::ev_set( (long))' verlet.o: In function `LAMMPS_NS::Verlet::run( (int))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./verlet.cpp:223: undefined reference to `LAMMPS_NS::Integrate::ev_set( (long))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./verlet.cpp:302: undefined reference to `LAMMPS_NS::Output::write( (long))' write_restart.o: In function `LAMMPS_NS::WriteRestart::write( (char *))': /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./write_restart.cpp:185: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi/./write_restart.cpp:186: undefined reference to `LAMMPS_NS::Memory::smalloc( (long, char const *))' /usr/bin/ld: link errors found, deleting executable `../lmp_kraken_pgi' make[1]: *** [../lmp_kraken_pgi] Error 2 make[1]: Leaving directory `/nics/c/home/afrachi1/LAMMPS_9-12-12/LAMMPS_9-12-12/src/Obj_kraken_pgi' make: *** [kraken_pgi] Error 2