# ----------------- Init Section ----------------- atom_style full units lj pair_style hybrid lj/cut 2.0 bond_style hybrid harmonic special_bonds lj 0.0 0.0 0.0 fix fxPropAtom all property/atom i_polyindex ghost yes # ----------------- Atom Definition Section ----------------- read_data system.data fix fxPropAtom NULL PolyIndex # ----------------- Settings Section ----------------- pair_coeff 1 1 lj/cut 1.0 0.89 1.0 pair_coeff 2 2 lj/cut 1.0 1.78 2.0 bond_coeff 1 harmonic 100.0 1.0 bond_coeff 2 harmonic 10.0 0.0 group gImmobile type 1 # ----------------- Run Section ----------------- timestep 0.001 thermo 20 thermo_style custom step cpu temp etotal press vol dump 1 all custom 20 traj.lammpstrj id mol type x y z ix iy iz type group gMobile subtract all gImmobile fix fxLAN gMobile langevin 0.0 0.0 100 48279 fix fxNVE gMobile nve #(<--needed by fix langevin) run 1000