# Title goes here units real atom_style full read_restart restart.* pair_style lj/gromacs 14.0 15.0 bond_style harmonic angle_style harmonic #cosine/squared dihedral_style charmm special_bonds fene ########################################### pair_coeff 1 1 0.3 5.5 bond_coeff 1 5.0 3.5 angle_coeff 1 5.0 110.0 dihedral_coeff 1 0.5 3 180 0.0 ########################################### ############################################################# neighbor 3.0 bin neigh_modify delay 0 every 10 check yes timestep 20.0 thermo_style multi thermo 10000 dump 1 all dcd 50000 CG_group.dcd dump_modify 1 unwrap yes ############################################################# # Aight, lets do it. minimize 1e-6 1e-6 10000 10000 restart 500000 restart.* variable t_RT equal 300.0 variable t_high equal 400.0 velocity all create ${t_RT} 2345 rot no dist gaussian fix 1 all nve fix 2 all press/berendsen iso 1.0 1.0 10000.0 modulus 21000.0 fix 3 all temp/berendsen ${t_RT} ${t_RT} 1000.0 run 1000000