-------------CPU AFFINITY------------- RANK:0 CPU_SET: 0 1 RANK:1 CPU_SET: 2 3 RANK:2 CPU_SET: 4 5 RANK:3 CPU_SET: 6 7 RANK:4 CPU_SET: 8 9 RANK:5 CPU_SET: 10 11 RANK:6 CPU_SET: 12 13 RANK:7 CPU_SET: 14 15 RANK:8 CPU_SET: 16 17 RANK:9 CPU_SET: 18 19 ------------------------------------- LAMMPS (11 Sep 2015-ICMS) using 2 OpenMP thread(s) per MPI task using multi-threaded neighbor list subroutines using multi-threaded neighbor list subroutines Reading data file ... orthogonal box = (-75 -75 -78.903) to (75 75 78.903) 5 by 4 by 19 MPI processor grid Performance: 2.560 ns/day, 9.375 hours/ns, 14.815 timesteps/s 194.4% CPU use with 380 MPI tasks x 2 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %CPU | %total ----------------------------------------------------------------------- Pair | 3.9542 | 19.387 | 26.495 | 102.3 | 199.0 | 14.36 Bond | 0.023363 | 0.11853 | 0.57528 | 49.5 | 105.8 | 0.09 Kspace | 14.595 | 21.308 | 36.735 | 99.4 | 197.6 | 15.78 Neigh | 43.562 | 43.883 | 44.125 | 1.7 | 198.7 | 32.51 Comm | 25.643 | 28.26 | 30.353 | 15.8 | 184.4 | 20.93 Output | 0.12686 | 0.127 | 0.12976 | 0.0 | 100.0 | 0.09 Modify | 18.839 | 21.421 | 26.506 | 20.0 | 191.4 | 15.87 Other | | 0.4958 | | | | 0.37 Thread timing breakdown (MPI rank 0): Total threaded time 49.03 / 36.3% Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 10.933 | 11.047 | 11.161 | 3.4 | 22.53 Bond | 0.0024073 | 0.0027177 | 0.0030282 | 0.6 | 0.01 Kspace | 0.91547 | 0.97254 | 1.0296 | 5.8 | 1.98 Neigh | 29.247 | 29.288 | 29.33 | 0.8 | 59.73 Reduce | 7.6772 | 7.7204 | 7.7635 | 1.6 | 15.75 Nlocal: 796.424 ave 1276 max 0 min Histogram: 25 9 6 6 10 14 198 47 33 32 Nghost: 252314 ave 261941 max 242414 min Histogram: 25 28 58 34 53 32 32 43 45 30 Neighs: 446840 ave 779711 max 0 min Histogram: 30 9 8 7 31 104 103 45 26 17