# Martini Force Field Parameters units real atom_style full #read_data A5-S30-A5_sheet_group.data read_restart restart_A5-S30-A5.* pair_style hybrid lj/cut 15.0 lj/gromacs 9.0 12.0 bond_style harmonic angle_style cosine/squared dihedral_style charmm special_bonds fene ############################################################# include ASA_Sheet.ff ############################################################# neighbor 3.0 bin #neigh_modify delay 10 check yes page 200000 one 5000 binsize 15.0 neigh_modify delay 0 every 1 check yes page 200000 one 10000 binsize 30.0 communicate single cutoff 50.0 thermo_style multi thermo 1000 dump 1 all dcd 100000 A5-S30-A5_sheet_group.dcd dump_modify 1 unwrap yes ############################################################# timestep 1.0 min_style fire minimize 1e-6 1e-6 10000 10000 min_style cg minimize 1e-6 1e-6 10000 10000 restart 500000 restart_A5-S30-A5 variable t_RT equal 300.0 velocity all create ${t_RT} 1984 dist gaussian mom yes rot yes timestep 20.0 fix 1 all nvt temp ${t_RT} ${t_RT} 20000.0 run 1000000