# Box of 1000 water molecules. variable run string tip3p_aa_02 echo log log ${run}.log # Neighbour list. neighbor 2.0 bin neigh_modify check yes # Force field definition. boundary p p p units real atom_style full pair_style lj/charmm/coul/long 8.0 10.0 bond_style harmonic angle_style charmm dihedral_style charmm kspace_style pppm 0.0001 # Atom Definition read_data "tip3p_box.data" # Settings mass 1 15.9994 mass 2 1.0079 pair_coeff 1 1 0.102 3.188 pair_coeff 2 2 0.0 0.0 bond_coeff 1 450.0 0.9572 angle_coeff 1 55.0 104.52 0.0 0.0 # Physical observables. thermo 1 thermo_style custom step etotal evdwl ecoul elong ke pe temp timestep 2. velocity all create 300 391624 dist gaussian fix 1 all shake .0001 10 0 m 1.0079 a 1 fix 2 all nvt temp 300 300 200. run 10 run 0 # Same value run 0 # Here it changes! run 0 run 0 run 0