# 3d metal grain boundary simulation units metal boundary p p p neighbor 1.0 bin neigh_modify every 1 delay 0 check yes atom_style atomic read_data tilt.txt pair_style eam pair_coeff * * cuu3.eam mass * 63.55 delete_atoms overlap 0.5 2 3 delete_atoms overlap 0.5 2 4 delete_atoms overlap 0.5 1 3 delete_atoms overlap 0.5 1 4 delete_atoms overlap 0.5 1 1 delete_atoms overlap 0.5 2 2 delete_atoms overlap 0.5 3 3 delete_atoms overlap 0.5 4 4 delete_atoms overlap 0.5 1 2 delete_atoms overlap 0.5 3 4 compute new3d all temp #setup run velocity all create 300 376890 fix 1 all nve fix 2 all temp/rescale 50 300.0 300.0 10.0 1.0 timestep 0.001 thermo 20 dump mydump all atom 20 dump.GB run 2000