vagrant@vagrant-ubuntu-trusty-64:~/lammps-8Mar18/src$ make lib-kim args="-p /usr/local/lib/kim-api-v1/" Installing lib kim Created /home/vagrant/lammps-8Mar18/lib/kim/Makefile.KIM_DIR using /usr/local/lib/kim-api-v1 vagrant@vagrant-ubuntu-trusty-64:~/lammps-8Mar18/src$ make yes-kim Installing package kim vagrant@vagrant-ubuntu-trusty-64:~/lammps-8Mar18/src$ make serial make[1]: Entering directory `/home/vagrant/lammps-8Mar18/src/Obj_serial' make[1]: Leaving directory `/home/vagrant/lammps-8Mar18/src/Obj_serial' make[1]: Entering directory `/home/vagrant/lammps-8Mar18/src/Obj_serial' g++ -g -O3 -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -I../STUBS -I/usr/local/lib/kim-api-v1/include -c ../main.cpp g++ -g -O -L../STUBS -m64 -L/usr/local/lib/kim-api-v1 angle_charmm.o angle_cosine.o angle_cosine_delta.o angle_cosine_periodic.o angle_cosine_squared.o angle.o angle_harmonic.o angle_hybrid.o angle_table.o angle_zero.o atom.o atom_map.o atom_vec_angle.o atom_vec_atomic.o atom_vec_body.o atom_vec_bond.o atom_vec_charge.o atom_vec.o atom_vec_ellipsoid.o atom_vec_full.o atom_vec_hybrid.o atom_vec_line.o atom_vec_molecular.o atom_vec_sphere.o atom_vec_template.o atom_vec_tri.o balance.o body.o bond.o bond_fene.o bond_fene_expand.o bond_gromos.o bond_harmonic.o bond_hybrid.o bond_morse.o bond_nonlinear.o bond_quartic.o bond_table.o bond_zero.o change_box.o citeme.o comm_brick.o comm.o comm_tiled.o compute_aggregate_atom.o compute_angle.o compute_angle_local.o compute_angmom_chunk.o compute_bond.o compute_bond_local.o compute_centro_atom.o compute_chunk_atom.o compute_cluster_atom.o compute_cna_atom.o compute_com_chunk.o compute_com.o compute_contact_atom.o compute_coord_atom.o compute.o compute_dihedral.o compute_dihedral_local.o compute_dipole_chunk.o compute_displace_atom.o compute_erotate_sphere_atom.o compute_erotate_sphere.o compute_fragment_atom.o compute_global_atom.o compute_group_group.o compute_gyration_chunk.o compute_gyration.o compute_heat_flux.o compute_hexorder_atom.o compute_improper.o compute_improper_local.o compute_inertia_chunk.o compute_ke_atom.o compute_ke.o compute_msd_chunk.o compute_msd.o compute_omega_chunk.o compute_orientorder_atom.o compute_pair.o compute_pair_local.o compute_pe_atom.o compute_pe.o compute_pressure.o compute_property_atom.o compute_property_chunk.o compute_property_local.o compute_rdf.o compute_reduce.o compute_reduce_region.o compute_slice.o compute_stress_atom.o compute_temp_chunk.o compute_temp_com.o compute_temp.o compute_temp_deform.o compute_temp_partial.o compute_temp_profile.o compute_temp_ramp.o compute_temp_region.o compute_temp_sphere.o compute_torque_chunk.o compute_vacf.o compute_vcm_chunk.o create_atoms.o create_bonds.o create_box.o delete_atoms.o delete_bonds.o dihedral_charmm.o dihedral_charmmfsw.o dihedral.o dihedral_harmonic.o dihedral_helix.o dihedral_hybrid.o dihedral_multi_harmonic.o dihedral_opls.o dihedral_zero.o displace_atoms.o domain.o dump_atom.o dump_cfg.o dump.o dump_custom.o dump_dcd.o dump_image.o dump_local.o dump_movie.o dump_xyz.o error.o ewald.o ewald_disp.o fft3d.o fft3d_wrap.o finish.o fix_adapt.o fix_addforce.o fix_ave_atom.o fix_ave_chunk.o fix_ave_correlate.o fix_aveforce.o fix_ave_histo.o fix_ave_histo_weight.o fix_ave_time.o fix_balance.o fix_box_relax.o fix_cmap.o fix_controller.o fix.o fix_deform.o fix_deprecated.o fix_drag.o fix_dt_reset.o fix_enforce2d.o fix_external.o fix_gravity.o fix_group.o fix_halt.o fix_heat.o fix_indent.o fix_langevin.o fix_lineforce.o fix_minimize.o fix_momentum.o fix_move.o fix_neigh_history.o fix_nh.o fix_nh_sphere.o fix_nph.o fix_nph_sphere.o fix_npt.o fix_npt_sphere.o fix_nve.o fix_nve_limit.o fix_nve_noforce.o fix_nve_sphere.o fix_nvt.o fix_nvt_sllod.o fix_nvt_sphere.o fix_planeforce.o fix_press_berendsen.o fix_print.o fix_property_atom.o fix_qeq_comb.o fix_read_restart.o fix_recenter.o fix_respa.o fix_restrain.o fix_setforce.o fix_spring_chunk.o fix_spring.o fix_spring_rg.o fix_spring_self.o fix_store.o fix_store_force.o fix_store_state.o fix_temp_berendsen.o fix_temp_csld.o fix_temp_csvr.o fix_temp_rescale.o fix_tmd.o fix_tune_kspace.o fix_vector.o fix_viscous.o fix_wall.o fix_wall_harmonic.o fix_wall_lj1043.o fix_wall_lj126.o fix_wall_lj93.o fix_wall_reflect.o fix_wall_region.o force.o gridcomm.o group.o image.o imbalance.o imbalance_group.o imbalance_neigh.o imbalance_store.o imbalance_time.o imbalance_var.o improper.o improper_cvff.o improper_harmonic.o improper_hybrid.o improper_umbrella.o improper_zero.o info.o input.o integrate.o irregular.o kspace.o lammps.o lattice.o library.o main.o math_extra.o math_special.o memory.o min_cg.o min.o min_fire.o min_hftn.o minimize.o min_linesearch.o min_quickmin.o min_sd.o modify.o molecule.o msm_cg.o msm.o nbin.o nbin_standard.o neighbor.o neigh_list.o neigh_request.o npair_copy.o npair.o npair_full_bin_atomonly.o npair_full_bin.o npair_full_bin_ghost.o npair_full_multi.o npair_full_nsq.o npair_full_nsq_ghost.o npair_half_bin_atomonly_newton.o npair_half_bin_newtoff.o npair_half_bin_newtoff_ghost.o npair_half_bin_newton.o npair_half_bin_newton_tri.o npair_halffull_newtoff.o npair_halffull_newton.o npair_half_multi_newtoff.o npair_half_multi_newton.o npair_half_multi_newton_tri.o npair_half_nsq_newtoff.o npair_half_nsq_newtoff_ghost.o npair_half_nsq_newton.o npair_half_respa_bin_newtoff.o npair_half_respa_bin_newton.o npair_half_respa_bin_newton_tri.o npair_half_respa_nsq_newtoff.o npair_half_respa_nsq_newton.o npair_half_size_bin_newtoff.o npair_half_size_bin_newton.o npair_half_size_bin_newton_tri.o npair_half_size_nsq_newtoff.o npair_half_size_nsq_newton.o npair_skip.o npair_skip_respa.o npair_skip_size.o npair_skip_size_off2on.o npair_skip_size_off2on_oneside.o nstencil.o nstencil_full_bin_2d.o nstencil_full_bin_3d.o nstencil_full_ghost_bin_2d.o nstencil_full_ghost_bin_3d.o nstencil_full_multi_2d.o nstencil_full_multi_3d.o nstencil_half_bin_2d_newtoff.o nstencil_half_bin_2d_newton.o nstencil_half_bin_2d_newton_tri.o nstencil_half_bin_3d_newtoff.o nstencil_half_bin_3d_newton.o nstencil_half_bin_3d_newton_tri.o nstencil_half_ghost_bin_2d_newtoff.o nstencil_half_ghost_bin_3d_newtoff.o nstencil_half_multi_2d_newtoff.o nstencil_half_multi_2d_newton.o nstencil_half_multi_2d_newton_tri.o nstencil_half_multi_3d_newtoff.o nstencil_half_multi_3d_newton.o nstencil_half_multi_3d_newton_tri.o ntopo_angle_all.o ntopo_angle_partial.o ntopo_angle_template.o ntopo_bond_all.o ntopo_bond_partial.o ntopo_bond_template.o ntopo.o ntopo_dihedral_all.o ntopo_dihedral_partial.o ntopo_dihedral_template.o ntopo_improper_all.o ntopo_improper_partial.o ntopo_improper_template.o output.o pair_adp.o pair_airebo.o pair_airebo_morse.o pair_beck.o pair_bop.o pair_born_coul_dsf.o pair_born_coul_long.o pair_born_coul_msm.o pair_born_coul_wolf.o pair_born.o pair_buck_coul_cut.o pair_buck_coul_long.o pair_buck_coul_msm.o pair_buck.o pair_buck_long_coul_long.o pair_comb3.o pair_comb.o pair_coul_cut.o pair_coul_debye.o pair_coul_dsf.o pair_coul_long.o pair_coul_msm.o pair_coul_streitz.o pair_coul_wolf.o pair.o pair_dpd.o pair_dpd_tstat.o pair_eam_alloy.o pair_eam.o pair_eam_fs.o pair_eim.o pair_gauss.o pair_gw.o pair_gw_zbl.o pair_hbond_dreiding_lj.o pair_hbond_dreiding_morse.o pair_hybrid.o pair_hybrid_overlay.o pair_kim.o pair_lcbop.o pair_lj96_cut.o pair_lj_charmm_coul_charmm.o pair_lj_charmm_coul_charmm_implicit.o pair_lj_charmm_coul_long.o pair_lj_charmm_coul_msm.o pair_lj_charmmfsw_coul_charmmfsh.o pair_lj_charmmfsw_coul_long.o pair_lj_cubic.o pair_lj_cut_coul_cut.o pair_lj_cut_coul_debye.o pair_lj_cut_coul_dsf.o pair_lj_cut_coul_long.o pair_lj_cut_coul_msm.o pair_lj_cut_coul_wolf.o pair_lj_cut.o pair_lj_cut_tip4p_cut.o pair_lj_cut_tip4p_long.o pair_lj_expand.o pair_lj_gromacs_coul_gromacs.o pair_lj_gromacs.o pair_lj_long_coul_long.o pair_lj_long_tip4p_long.o pair_lj_smooth.o pair_lj_smooth_linear.o pair_mie_cut.o pair_morse.o pair_nb3b_harmonic.o pair_polymorphic.o pair_rebo.o pair_soft.o pair_sw.o pair_table.o pair_tersoff.o pair_tersoff_mod_c.o pair_tersoff_mod.o pair_tersoff_zbl.o pair_tip4p_cut.o pair_tip4p_long.o pair_ufm.o pair_vashishta.o pair_vashishta_table.o pair_yukawa.o pair_zbl.o pair_zero.o pppm_cg.o pppm.o pppm_disp.o pppm_disp_tip4p.o pppm_stagger.o pppm_tip4p.o procmap.o python.o random_mars.o random_park.o rcb.o read_data.o read_dump.o reader.o reader_native.o reader_xyz.o read_restart.o region_block.o region_cone.o region.o region_cylinder.o region_intersect.o region_plane.o region_prism.o region_sphere.o region_union.o remap.o remap_wrap.o replicate.o rerun.o respa.o run.o set.o special.o thermo.o timer.o universe.o update.o variable.o velocity.o verlet.o write_coeff.o write_data.o write_dump.o write_restart.o -lmpi_stubs -lkim-api-v1 -o ../lmp_serial size ../lmp_serial text data bss dec hex filename 5408186 8032 936 5417154 52a8c2 ../lmp_serial make[1]: Leaving directory `/home/vagrant/lammps-8Mar18/src/Obj_serial' vagrant@vagrant-ubuntu-trusty-64:~/lammps-8Mar18/src$ cd ../bench/ vagrant@vagrant-ubuntu-trusty-64:~/lammps-8Mar18/bench$ lammps-daily < in.kim LAMMPS (20 Apr 2018) OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (../comm.cpp:90) using 1 OpenMP thread(s) per MPI task Lattice spacing in x,y,z = 1.6796 1.6796 1.6796 Created orthogonal box = (0 0 0) to (33.5919 33.5919 33.5919) 1 by 1 by 1 MPI processor grid Created 32000 atoms Time spent = 0.00308895 secs ERROR: Unknown pair style kim (../force.cpp:262) Last command: pair_style kim KIMvirial Three_Body_Stillinger_Weber_Si__MO_405512056662_003