# ------------------------------- Initialization Section -------------------- units real atom_style full bond_style hybrid harmonic angle_style hybrid harmonic dihedral_style hybrid opls pair_style hybrid lj/cut/coul/long 10.0 10.0 pair_modify mix arithmetic special_bonds lj/coul 0.0 0.0 0.5 kspace_style pppm 0.0001 # ------------------------------- Atom Definition Section ------------------- read_data "system.data" # ------------------------------- Settings Section -------------------------- pair_coeff 1 1 lj/cut/coul/long 0.066 3.5 pair_coeff 2 2 lj/cut/coul/long 0.03 2.5 bond_coeff 1 harmonic 268.0 1.529 bond_coeff 2 harmonic 340.0 1.09 angle_coeff 1 harmonic 58.35 112.7 angle_coeff 2 harmonic 33.0 107.8 angle_coeff 3 harmonic 37.5 110.7 set type 1 charge -0.24 set type 2 charge 0.06 # ------------------------------- Run Section ------------------------------- # -- simulation protocol -- timestep 1.0 dump 1 all custom 1000 traj.lammpstrj id mol type x y z ix iy iz fix fxnpt all npt temp 300.0 300.0 100.0 iso 1.0 1.0 1000.0 drag 1.0 thermo 100 run 4000