Delete bonds in visualisation in fix bond react

OVITO
1

Hello everyone,
I am trying to visualize bond breaking with OVITO using fix bond/react. The code runs fine (the bonds are broken and this is visible also in the data files from the begining and ending of the simulation). The problem is that us I understand in the .dump file there is no information that alows ovito to understand that the bond is broken. In the visualisation the atoms behave as like they are not conected but in OVITO they seem to be.

image

How can I visualise that? Is there something that I have to include in the .in file in the dump command?

2

Hi,
Please have a look at this section in our manual: Varying bond connectivity which describes how to dump the changing bond topology with LAMMPS and import that information together with the atomic trajectories in OVITO.

3

Thank you so much!