Energy Minimization Discrepancy in Mirrored vs. Distinct Graphene–Water Systems

Hello,

I’m planning to study the pressure dependence of heat transfer in a graphene–water system. For computational efficiency, To generate different confining pressures of water I’d like to run simulations on a single replica and then create a mirror-symmetric copy, rather than simulating a larger system with fully distinct particle types.

I’m comparing the energy minimization of two graphene–water systems:

  • System 1: Graphene is modeled with 12 particle types (e.g., types 3–7 and 8–12 for graphene) and water as types 1–2.
  • System 2: Each graphene sheet is assigned a unique type (totaling 22 types) while water remains as types 1–2.

Both use identical interaction rules (Tersoff within graphene; LJ between graphene sheets and between graphene and water, with the same cutoff). Before minimization, the energies match exactly. However, after energy minimization, System 1 reaches an energy of about –76,717 eV, whereas System 2 minimizes to about –76,705 eV. Also, the minimization requires different number of steps to attain convergence in systems 1 and 2.

Why might the minimized energies differ despite the same starting energy and identical interaction parameters? Could this be due to numerical round-off differences, or convergence to different local minima because of the extra particle type distinctions?

My LAMMPS version is 29Aug2024. Any insights would be appreciated.
I’ve attached a snapshot of the system I’m dealing with.

Thanks in advance.

Outside the fact that you are using LAMMPS for this project, there is nothing pertaining to LAMMPS itself in this post. This is really about doing the research and thus off-topic for the LAMMPS category. I am thus re-categorizing it to the Science Talk category.