Heat flux application

Hello,
I am applying heat current at the center of a carbon nanotube structure and extracting it from one end of a substrate. I am using LAMMPS command fix heat. I have divided the structure into finite number of bins. However, after using this command, temperature of most of the bins is obtained to be zero. I had equilibrated the system to be at 300 Kelvin earlier. I do not know why the system temperature would go to zero. I have tried various values (of heat current as well as time steps) for this command and still got the same result.
The file is attached.

I am using LAMMPS 26 Jan 2017 version.

Best,
Ravi

Ni_Substrate_CNT_mttm.txt (3.77 KB)

Hello,
         I am applying heat current at the center of a carbon nanotube
structure and extracting it from one end of a substrate. I am using LAMMPS
command *fix heat. *I have divided the structure into finite number of
bins. However, after using this command, temperature of most of the bins is
obtained to be *zero*. I had equilibrated the system to be at 300 Kelvin
earlier. I do not know why the system temperature would go to zero. I have
tried various values (of heat current as well as time steps) for this
command and still got the same result.

​you have to do systematic debugging of your input. remove *everything* but
the initial structure, force field and basic time integration w/o fix heat.

then add back commands one at a time and add the heat fixes one at a time
and observe at each step, what changes and compare with the documentation.
that should help you to determine which step is causing the unexpected
behavior.

axel.