Hi,
I wanted to run just individual python script, ‘chain.py’ which requires an input ‘Data file’ to generate polymer beads but was not successful. In which format, I should define the data file – will it be similar to ‘def.chain’ (attached below)?
“Polymer chain definition
0.8442 rhostar
592984 random # seed (8 digits or less)
1 # of sets of chains (blank line + 6 values for each set)
0 molecule tag rule: 0 = by mol, 1 = from 1 end, 2 = from 2 ends
320 number of chains
100 monomers/chain
1 type of monomers (for output into LAMMPS file)
1 type of bonds (for output into LAMMPS file)
0.97 distance between monomers (in reduced units)
1.02 no distance less than this from site i-1 to i+1 (reduced unit)”
Thanks,
Nasir