[lammps-users] fix deform and displace_box

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1

Good time of day,
dear lammps users.
I got a question about xmovie tool
I have the following data for a cascade atom.
I write xmovie -scale dump.file and it works seemingly without error but can't see no atom on the picture.
I change color, thickness, x,y,z coordinates in xmovie viewer but no result.
Its window is still black without any sign of moving particle.
Thank you for your attention.
ITEM: TIMESTEP
2000
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.669 132.978 268.724
ITEM: TIMESTEP
2100
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.818 133.246 266.23 86.9109 0
ITEM: TIMESTEP
2200
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.9 133.385 264.094
ITEM: TIMESTEP
2300
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.883 133.774 263.647
ITEM: TIMESTEP
2400
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.84 134.14 263.388
ITEM: TIMESTEP
2500
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.828 134.507 263.174
ITEM: TIMESTEP
2600
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.865 134.885 263.035
ITEM: TIMESTEP
2700
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.903 135.262 262.982
ITEM: TIMESTEP
2800
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.894 135.615 263.009
ITEM: TIMESTEP
2900
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 135.832 135.852 263.065
ITEM: TIMESTEP
3000
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.752 135.932 263.091
ITEM: TIMESTEP
3100
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.694 135.903 263.099
ITEM: TIMESTEP
3200
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.685 135.829 263.15
ITEM: TIMESTEP
3300
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.733 135.736 263.262
ITEM: TIMESTEP
3400
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.824 135.625 263.375
ITEM: TIMESTEP
3500
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.92 135.491 263.42
ITEM: TIMESTEP
3600
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.958 135.337 263.386
ITEM: TIMESTEP
3700
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.917 135.189 263.325
ITEM: TIMESTEP
3800
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.874 135.069 263.345
ITEM: TIMESTEP
3900
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.889 134.977 263.524
ITEM: TIMESTEP
4000
ITEM: NUMBER OF ATOMS
1
ITEM: BOX BOUNDS
0 271.5
0 271.5
0 271.5
ITEM: ATOMS id type x y z
1 1 135.932 134.902 263.768

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2

Good time of day,
dear lammps users.
I got a question about xmovie tool

dear anonymous poster,

please have the courtesy of using a subject
that matches your question. you should keep
in mind that posting a new question by replying
to an old e-mail already messes up many threaded
mail displays, as the In-Reply-To: message header
is not removed, but with a changed subject, the
better mail reader can still detect that you were
too lazy to cut-n-paste the mailing list address
and still start a new thread display. without a
new subject this is impossible and very annoying.

thanks.

I have the following data for a cascade atom.
I write xmovie -scale dump.file and it works seemingly without error
but can't see no atom on the picture.
I change color, thickness, x,y,z coordinates in xmovie viewer but no
result.

why do you use the -scale flag, if your coordinates
are very obviously not scaled?

axel.

3

Try moving the sliders around. Sometimes you get a slab
view that the atoms are outside of, until you move
the sliders.

Steve

2010/10/3 t t <[email protected]...>: