[lammps-users] LAMMPS Installation in MAC

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1

I am facing a few problems while installing LAMMPS in MAC,

I could install the code correctly on my linux machine (by creating Makefile.foo and using the “make foo” command). The code runs fine.

But, while I try to install the same on a MAC machine, with exactly same values for MPI and FFT (in my case -DFFT_NONE) variables. I get an error saying,

symbol(s) not found
ld returned 1 exit status

This is something, I am unable to resolve. I have tried with Makefile.mac, Makefile.mac_mpi and also creating a new Makefile.foo in the new MAC system, to no avail. I use "make mac’ command. I have tried with g++ and c++ compilers in MAC.

I will appreciate help regarding this.

2

I am facing a few problems while installing LAMMPS in MAC,
I could install the code correctly on my linux machine (by creating
Makefile.foo and using the "make foo" command). The code runs fine.

But, while I try to install the same on a MAC machine, with exactly same
values for MPI and FFT (in my case -DFFT_NONE) variables. I get an error
saying,

symbol(s) not found
ld returned 1 exit status

if you'd tell us _which_ symbols were not found,
we could do an educated guess.

these kind of compilation issues are usually best
solved with a local expert. they are not a problem
of lammps itself.

axel.

3

The following symbols are not found.

Undefined symbols:
“MPI_Waitany(int, int*, int*, MPI_Status*)”, referenced from:
remap_3d(double*, double*, double*, remap_plan_3d*)in remap.o
“MPI_Finalize()”, referenced from:
LAMMPS_NS::Error::all(char const*)in error.o
LAMMPS_NS::Error::universe_all(char const*)in error.o
_main in main.o
“MPI_Waitall(int, int*, MPI_Status*)”, referenced from:
LAMMPS_NS::Comm::irregular_perform(LAMMPS_NS::Comm::Plan*, double*, int*, double*)in comm.o
“MPI_Comm_dup(int, int*)”, referenced from:
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int)in remap.o
“MPI_Gatherv(void*, int, int, void*, int*, int*, int, int, int)”, referenced from:
LAMMPS_NS::DumpCFG::create_sorted_tags() in dump_cfg.o
“MPI_Comm_free(int*)”, referenced from:
LAMMPS_NS::Comm::set_procs() in comm.o
LAMMPS_NS::LAMMPS::~LAMMPS()in lammps.o
remap_3d_destroy_plan(remap_plan_3d*) in remap.o
LAMMPS_NS::Temper::~Temper()in temper.o
LAMMPS_NS::Temper::~Temper()in temper.o
“MPI_Bcast(void*, int, int, int, int)”, referenced from:
LAMMPS_NS::AngleCharmm::read_restart(__sFILE*) in angle_charmm.o
LAMMPS_NS::AngleCharmm::read_restart(__sFILE*) in angle_charmm.o
LAMMPS_NS::AngleCharmm::read_restart(__sFILE*) in angle_charmm.o
LAMMPS_NS::AngleCharmm::read_restart(__sFILE*) in angle_charmm.o
LAMMPS_NS::AngleCosine::read_restart(__sFILE*) in angle_cosine.o
LAMMPS_NS::AngleCosineSquared::read_restart(__sFILE*) in angle_cosine_squared.o
LAMMPS_NS::AngleCosineSquared::read_restart(__sFILE*) in angle_cosine_squared.o
LAMMPS_NS::AngleHarmonic::read_restart(__sFILE*) in angle_harmonic.o
LAMMPS_NS::AngleHarmonic::read_restart(__sFILE*) in angle_harmonic.o
LAMMPS_NS::AngleHybrid::read_restart(__sFILE*) in angle_hybrid.o
LAMMPS_NS::AngleHybrid::read_restart(__sFILE*) in angle_hybrid.o
LAMMPS_NS::AngleHybrid::read_restart(__sFILE*) in angle_hybrid.o
LAMMPS_NS::AngleHybrid::read_restart(__sFILE*) in angle_hybrid.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::read_restart(__sFILE*) in angle_table.o
LAMMPS_NS::AngleTable::read_restart(__sFILE*) in angle_table.o
LAMMPS_NS::BondFENE::read_restart(__sFILE*) in bond_fene.o
LAMMPS_NS::BondFENE::read_restart(__sFILE*) in bond_fene.o
LAMMPS_NS::BondFENE::read_restart(__sFILE*) in bond_fene.o
LAMMPS_NS::BondFENE::read_restart(__sFILE*) in bond_fene.o
LAMMPS_NS::BondFENEExpand::read_restart(__sFILE*) in bond_fene_expand.o
LAMMPS_NS::BondFENEExpand::read_restart(__sFILE*) in bond_fene_expand.o
LAMMPS_NS::BondFENEExpand::read_restart(__sFILE*) in bond_fene_expand.o
LAMMPS_NS::BondFENEExpand::read_restart(__sFILE*) in bond_fene_expand.o
LAMMPS_NS::BondFENEExpand::read_restart(__sFILE*) in bond_fene_expand.o
LAMMPS_NS::BondHarmonic::read_restart(__sFILE*) in bond_harmonic.o
LAMMPS_NS::BondHarmonic::read_restart(__sFILE*) in bond_harmonic.o
LAMMPS_NS::BondHybrid::read_restart(__sFILE*) in bond_hybrid.o
LAMMPS_NS::BondHybrid::read_restart(__sFILE*) in bond_hybrid.o
LAMMPS_NS::BondHybrid::read_restart(__sFILE*) in bond_hybrid.o
LAMMPS_NS::BondHybrid::read_restart(__sFILE*) in bond_hybrid.o
LAMMPS_NS::BondMorse::read_restart(__sFILE*) in bond_morse.o
LAMMPS_NS::BondMorse::read_restart(__sFILE*) in bond_morse.o
LAMMPS_NS::BondMorse::read_restart(__sFILE*) in bond_morse.o
LAMMPS_NS::BondNonlinear::read_restart(__sFILE*) in bond_nonlinear.o
LAMMPS_NS::BondNonlinear::read_restart(__sFILE*) in bond_nonlinear.o
LAMMPS_NS::BondNonlinear::read_restart(__sFILE*) in bond_nonlinear.o
LAMMPS_NS::BondQuartic::read_restart(__sFILE*) in bond_quartic.o
LAMMPS_NS::BondQuartic::read_restart(__sFILE*) in bond_quartic.o
LAMMPS_NS::BondQuartic::read_restart(__sFILE*) in bond_quartic.o
LAMMPS_NS::BondQuartic::read_restart(__sFILE*) in bond_quartic.o
LAMMPS_NS::BondQuartic::read_restart(__sFILE*) in bond_quartic.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::read_restart(__sFILE*) in bond_table.o
LAMMPS_NS::BondTable::read_restart(__sFILE*) in bond_table.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::DihedralCharmm::read_restart(__sFILE*) in dihedral_charmm.o
LAMMPS_NS::DihedralCharmm::read_restart(__sFILE*) in dihedral_charmm.o
LAMMPS_NS::DihedralCharmm::read_restart(__sFILE*) in dihedral_charmm.o
LAMMPS_NS::DihedralCharmm::read_restart(__sFILE*) in dihedral_charmm.o
LAMMPS_NS::DihedralHarmonic::read_restart(__sFILE*) in dihedral_harmonic.o
LAMMPS_NS::DihedralHarmonic::read_restart(__sFILE*) in dihedral_harmonic.o
LAMMPS_NS::DihedralHarmonic::read_restart(__sFILE*) in dihedral_harmonic.o
LAMMPS_NS::DihedralHelix::read_restart(__sFILE*) in dihedral_helix.o
LAMMPS_NS::DihedralHelix::read_restart(__sFILE*) in dihedral_helix.o
LAMMPS_NS::DihedralHelix::read_restart(__sFILE*) in dihedral_helix.o
LAMMPS_NS::DihedralHybrid::read_restart(__sFILE*) in dihedral_hybrid.o
LAMMPS_NS::DihedralHybrid::read_restart(__sFILE*) in dihedral_hybrid.o
LAMMPS_NS::DihedralHybrid::read_restart(__sFILE*) in dihedral_hybrid.o
LAMMPS_NS::DihedralHybrid::read_restart(__sFILE*) in dihedral_hybrid.o
LAMMPS_NS::DihedralMultiHarmonic::read_restart(__sFILE*) in dihedral_multi_harmonic.o
LAMMPS_NS::DihedralMultiHarmonic::read_restart(__sFILE*) in dihedral_multi_harmonic.o
LAMMPS_NS::DihedralMultiHarmonic::read_restart(__sFILE*) in dihedral_multi_harmonic.o
LAMMPS_NS::DihedralMultiHarmonic::read_restart(__sFILE*) in dihedral_multi_harmonic.o
LAMMPS_NS::DihedralMultiHarmonic::read_restart(__sFILE*) in dihedral_multi_harmonic.o
LAMMPS_NS::DihedralOPLS::read_restart(__sFILE*) in dihedral_opls.o
LAMMPS_NS::DihedralOPLS::read_restart(__sFILE*) in dihedral_opls.o
LAMMPS_NS::DihedralOPLS::read_restart(__sFILE*) in dihedral_opls.o
LAMMPS_NS::DihedralOPLS::read_restart(__sFILE*) in dihedral_opls.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixOrientFCC::FixOrientFCC(LAMMPS_NS::LAMMPS*, int, char**)in fix_orient_fcc.o
LAMMPS_NS::FixOrientFCC::FixOrientFCC(LAMMPS_NS::LAMMPS*, int, char**)in fix_orient_fcc.o
LAMMPS_NS::FixTMD::readfile(char*)in fix_tmd.o
LAMMPS_NS::FixTMD::readfile(char*)in fix_tmd.o
LAMMPS_NS::FixTMD::readfile(char*)in fix_tmd.o
LAMMPS_NS::FixTMD::readfile(char*)in fix_tmd.o
LAMMPS_NS::FixTTM::FixTTM(LAMMPS_NS::LAMMPS*, int, char**)in fix_ttm.o
LAMMPS_NS::Group::read_restart(__sFILE*) in group.o
LAMMPS_NS::Group::read_restart(__sFILE*) in group.o
LAMMPS_NS::Group::read_restart(__sFILE*) in group.o
LAMMPS_NS::ImproperCvff::read_restart(__sFILE*) in improper_cvff.o
LAMMPS_NS::ImproperCvff::read_restart(__sFILE*) in improper_cvff.o
LAMMPS_NS::ImproperCvff::read_restart(__sFILE*) in improper_cvff.o
LAMMPS_NS::ImproperHarmonic::read_restart(__sFILE*) in improper_harmonic.o
LAMMPS_NS::ImproperHarmonic::read_restart(__sFILE*) in improper_harmonic.o
LAMMPS_NS::ImproperHybrid::read_restart(__sFILE*) in improper_hybrid.o
LAMMPS_NS::ImproperHybrid::read_restart(__sFILE*) in improper_hybrid.o
LAMMPS_NS::ImproperHybrid::read_restart(__sFILE*) in improper_hybrid.o
LAMMPS_NS::ImproperHybrid::read_restart(__sFILE*) in improper_hybrid.o
LAMMPS_NS::Input::file() in input.o
LAMMPS_NS::Input::file() in input.o
LAMMPS_NS::Input::file() in input.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::Modify::read_restart(__sFILE*) in modify.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairBornCoulLong::read_restart_settings(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart_settings(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart_settings(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart_settings(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBornCoulLong::read_restart(__sFILE*) in pair_born_coul_long.o
LAMMPS_NS::PairBuck::read_restart_settings(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart_settings(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart_settings(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuck::read_restart(__sFILE*) in pair_buck.o
LAMMPS_NS::PairBuckCoulCut::read_restart_settings(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart_settings(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart_settings(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart_settings(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulCut::read_restart(__sFILE*) in pair_buck_coul_cut.o
LAMMPS_NS::PairBuckCoulLong::read_restart_settings(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart_settings(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart_settings(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart_settings(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairBuckCoulLong::read_restart(__sFILE*) in pair_buck_coul_long.o
LAMMPS_NS::PairCoulCut::read_restart_settings(__sFILE*) in pair_coul_cut.o
LAMMPS_NS::PairCoulCut::read_restart_settings(__sFILE*) in pair_coul_cut.o
LAMMPS_NS::PairCoulCut::read_restart_settings(__sFILE*) in pair_coul_cut.o
LAMMPS_NS::PairCoulCut::read_restart(__sFILE*) in pair_coul_cut.o
LAMMPS_NS::PairCoulCut::read_restart(__sFILE*) in pair_coul_cut.o
LAMMPS_NS::PairCoulDebye::read_restart_settings(__sFILE*) in pair_coul_debye.o
LAMMPS_NS::PairCoulDebye::read_restart_settings(__sFILE*) in pair_coul_debye.o
LAMMPS_NS::PairCoulDebye::read_restart_settings(__sFILE*) in pair_coul_debye.o
LAMMPS_NS::PairCoulDebye::read_restart_settings(__sFILE*) in pair_coul_debye.o
LAMMPS_NS::PairCoulLong::read_restart_settings(__sFILE*) in pair_coul_long.o
LAMMPS_NS::PairCoulLong::read_restart_settings(__sFILE*) in pair_coul_long.o
LAMMPS_NS::PairCoulLong::read_restart_settings(__sFILE*) in pair_coul_long.o
LAMMPS_NS::PairDPD::read_restart_settings(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart_settings(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart_settings(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart_settings(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPD::read_restart(__sFILE*) in pair_dpd.o
LAMMPS_NS::PairDPDTstat::read_restart_settings(__sFILE*) in pair_dpd_tstat.o
LAMMPS_NS::PairDPDTstat::read_restart_settings(__sFILE*) in pair_dpd_tstat.o
LAMMPS_NS::PairDPDTstat::read_restart_settings(__sFILE*) in pair_dpd_tstat.o
LAMMPS_NS::PairDPDTstat::read_restart_settings(__sFILE*) in pair_dpd_tstat.o
LAMMPS_NS::PairDPDTstat::read_restart_settings(__sFILE*) in pair_dpd_tstat.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAM::read_file(char*)in pair_eam.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMAlloy::read_file(char*) in pair_eam_alloy.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairEAMFS::read_file(char*)in pair_eam_fs.o
LAMMPS_NS::PairHybrid::read_restart(__sFILE*) in pair_hybrid.o
LAMMPS_NS::PairHybrid::read_restart(__sFILE*) in pair_hybrid.o
LAMMPS_NS::PairHybrid::read_restart(__sFILE*) in pair_hybrid.o
LAMMPS_NS::PairHybrid::read_restart(__sFILE*) in pair_hybrid.o
LAMMPS_NS::PairLJ96Cut::read_restart_settings(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJ96Cut::read_restart_settings(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJ96Cut::read_restart_settings(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJ96Cut::read_restart(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJ96Cut::read_restart(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJ96Cut::read_restart(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJ96Cut::read_restart(__sFILE*) in pair_lj96_cut.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(__sFILE*) in pair_lj_charmm_coul_charmm.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCharmmCoulLong::read_restart(__sFILE*) in pair_lj_charmm_coul_long.o
LAMMPS_NS::PairLJCut::read_restart_settings(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCut::read_restart_settings(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCut::read_restart_settings(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCut::read_restart(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCut::read_restart(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCut::read_restart(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCut::read_restart(__sFILE*) in pair_lj_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulCut::read_restart(__sFILE*) in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(__sFILE*) in pair_lj_cut_coul_debye.o
LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(__sFILE*) in pair_lj_cut_coul_debye.o
LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(__sFILE*) in pair_lj_cut_coul_debye.o
LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(__sFILE*) in pair_lj_cut_coul_debye.o
LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(__sFILE*) in pair_lj_cut_coul_debye.o
LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLong::read_restart(__sFILE*) in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJCutCoulLongTIP4P::read_restart_settings(__sFILE*) in pair_lj_cut_coul_long_tip4p.o
LAMMPS_NS::PairLJExpand::read_restart_settings(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart_settings(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart_settings(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJExpand::read_restart(__sFILE*) in pair_lj_expand.o
LAMMPS_NS::PairLJGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacs::read_restart(__sFILE*) in pair_lj_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(__sFILE*) in pair_lj_gromacs_coul_gromacs.o
LAMMPS_NS::PairLJSmooth::read_restart_settings(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart_settings(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart_settings(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart_settings(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairLJSmooth::read_restart(__sFILE*) in pair_lj_smooth.o
LAMMPS_NS::PairMorse::read_restart_settings(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart_settings(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart_settings(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart(__sFILE*) in pair_morse.o
LAMMPS_NS::PairMorse::read_restart(__sFILE*) in pair_morse.o
LAMMPS_NS::PairSoft::read_restart_settings(__sFILE*) in pair_soft.o
LAMMPS_NS::PairSoft::read_restart_settings(__sFILE*) in pair_soft.o
LAMMPS_NS::PairSoft::read_restart(__sFILE*) in pair_soft.o
LAMMPS_NS::PairSoft::read_restart(__sFILE*) in pair_soft.o
LAMMPS_NS::PairSoft::read_restart(__sFILE*) in pair_soft.o
LAMMPS_NS::PairSoft::read_restart(__sFILE*) in pair_soft.o
LAMMPS_NS::PairSW::read_file(char*)in pair_sw.o
LAMMPS_NS::PairSW::read_file(char*)in pair_sw.o
LAMMPS_NS::PairSW::read_file(char*)in pair_sw.o
LAMMPS_NS::PairSW::read_file(char*)in pair_sw.o
LAMMPS_NS::PairSW::read_file(char*)in pair_sw.o
LAMMPS_NS::PairSW::read_file(char*)in pair_sw.o
LAMMPS_NS::PairTable::read_restart_settings(__sFILE*) in pair_table.o
LAMMPS_NS::PairTable::read_restart_settings(__sFILE*) in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTersoff::read_file(char*) in pair_tersoff.o
LAMMPS_NS::PairTersoff::read_file(char*) in pair_tersoff.o
LAMMPS_NS::PairTersoff::read_file(char*) in pair_tersoff.o
LAMMPS_NS::PairTersoff::read_file(char*) in pair_tersoff.o
LAMMPS_NS::PairTersoff::read_file(char*) in pair_tersoff.o
LAMMPS_NS::PairTersoff::read_file(char*) in pair_tersoff.o
LAMMPS_NS::PairTersoffZBL::read_file(char*) in pair_tersoff_zbl.o
LAMMPS_NS::PairTersoffZBL::read_file(char*) in pair_tersoff_zbl.o
LAMMPS_NS::PairTersoffZBL::read_file(char*) in pair_tersoff_zbl.o
LAMMPS_NS::PairTersoffZBL::read_file(char*) in pair_tersoff_zbl.o
LAMMPS_NS::PairTersoffZBL::read_file(char*) in pair_tersoff_zbl.o
LAMMPS_NS::PairTersoffZBL::read_file(char*) in pair_tersoff_zbl.o
LAMMPS_NS::PairYukawa::read_restart_settings(__sFILE*) in pair_yukawa.o
LAMMPS_NS::PairYukawa::read_restart_settings(_sFILE*) in pair_yukawa.o
LAMMPS_NS::PairYukawa::read_restart_settings(sFILE*) in pair_yukawa.o
LAMMPS_NS::PairYukawa::read_restart_settings(sFILE*) in pair_yukawa.o
LAMMPS_NS::PairYukawa::read_restart(sFILE*) in pair_yukawa.o
LAMMPS_NS::PairYukawa::read_restart(sFILE*) in pair_yukawa.o
LAMMPS_NS::PairYukawa::read_restart(sFILE*) in pair_yukawa.o
LAMMPS_NS::ReadData::parse_keyword(int, int)in read_data.o
LAMMPS_NS::ReadData::parse_keyword(int, int)in read_data.o
LAMMPS_NS::ReadData::parse_keyword(int, int)in read_data.o
LAMMPS_NS::ReadData::impropercoeffs(int) in read_data.o
LAMMPS_NS::ReadData::impropercoeffs(int) in read_data.o
LAMMPS_NS::ReadData::dihedralcoeffs(int) in read_data.o
LAMMPS_NS::ReadData::dihedralcoeffs(int) in read_data.o
LAMMPS_NS::ReadData::anglecoeffs(int) in read_data.o
LAMMPS_NS::ReadData::anglecoeffs(int) in read_data.o
LAMMPS_NS::ReadData::bondcoeffs() in read_data.o
LAMMPS_NS::ReadData::bondcoeffs() in read_data.o
LAMMPS_NS::ReadData::paircoeffs() in read_data.o
LAMMPS_NS::ReadData::paircoeffs() in read_data.o
LAMMPS_NS::ReadData::dipole() in read_data.o
LAMMPS_NS::ReadData::dipole() in read_data.o
LAMMPS_NS::ReadData::shape() in read_data.o
LAMMPS_NS::ReadData::shape() in read_data.o
LAMMPS_NS::ReadData::mass() in read_data.o
LAMMPS_NS::ReadData::mass() in read_data.o
LAMMPS_NS::ReadData::impropers() in read_data.o
LAMMPS_NS::ReadData::impropers() in read_data.o
LAMMPS_NS::ReadData::dihedrals() in read_data.o
LAMMPS_NS::ReadData::dihedrals() in read_data.o
LAMMPS_NS::ReadData::angles() in read_data.o
LAMMPS_NS::ReadData::angles() in read_data.o
LAMMPS_NS::ReadData::bonds() in read_data.o
LAMMPS_NS::ReadData::bonds() in read_data.o
LAMMPS_NS::ReadData::velocities() in read_data.o
LAMMPS_NS::ReadData::velocities() in read_data.o
LAMMPS_NS::ReadData::atoms() in read_data.o
LAMMPS_NS::ReadData::atoms() in read_data.o
LAMMPS_NS::ReadData::header(int) in read_data.o
LAMMPS_NS::ReadData::header(int) in read_data.o
LAMMPS_NS::ReadData::command(int, char**)in read_data.o
LAMMPS_NS::ReadData::command(int, char**)in read_data.o
LAMMPS_NS::ReadData::command(int, char**)in read_data.o
LAMMPS_NS::ReadData::command(int, char**)in read_data.o
LAMMPS_NS::ReadRestart::read_double() in read_restart.o
LAMMPS_NS::ReadRestart::read_int() in read_restart.o
LAMMPS_NS::ReadRestart::read_char() in read_restart.o
LAMMPS_NS::ReadRestart::read_char() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::force_fields() in read_restart.o
LAMMPS_NS::ReadRestart::type_arrays() in read_restart.o
LAMMPS_NS::ReadRestart::type_arrays() in read_restart.o
LAMMPS_NS::ReadRestart::type_arrays() in read_restart.o
LAMMPS_NS::ReadRestart::command(int, char**)in read_restart.o
LAMMPS_NS::ReadRestart::command(int, char**)in read_restart.o
LAMMPS_NS::Replicate::command(int, char**)in replicate.o
LAMMPS_NS::Replicate::command(int, char**)in replicate.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Variable::next(int, char**)in variable.o
“MPI_Comm_size(int, int*)”, referenced from:
LAMMPS_NS::Comm::Comm(LAMMPS_NS::LAMMPS*)in comm.o
LAMMPS_NS::Dump::Dump(LAMMPS_NS::LAMMPS*, int, char**)in dump.o
fft_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int*)in fft3d.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::FixShake::FixShake(LAMMPS_NS::LAMMPS*, int, char**)in fix_shake.o
LAMMPS_NS::Neighbor::Neighbor(LAMMPS_NS::LAMMPS*)in neighbor.o
LAMMPS_NS::PPPM::PPPM(LAMMPS_NS::LAMMPS*, int, char**)in pppm.o
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int)in remap.o
LAMMPS_NS::Special::Special(LAMMPS_NS::LAMMPS*)in special.o
LAMMPS_NS::Universe::Universe(LAMMPS_NS::LAMMPS*, int)in universe.o
LAMMPS_NS::WriteRestart::WriteRestart(LAMMPS_NS::LAMMPS*)in write_restart.o
“MPI_Get_count(MPI_Status*, int, int*)”, referenced from:
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Cart_create(int, int, int*, int*, int, int*)”, referenced from:
LAMMPS_NS::Comm::set_procs() in comm.o
“MPI_Irecv(void*, int, int, int, int, int, int*)”, referenced from:
LAMMPS_NS::Comm::irregular_perform(LAMMPS_NS::Comm::Plan*, double*, int*, double*)in comm.o
LAMMPS_NS::Comm::reverse_comm_compute(LAMMPS_NS::Compute*)in comm.o
LAMMPS_NS::Comm::forward_comm_compute(LAMMPS_NS::Compute*)in comm.o
LAMMPS_NS::Comm::reverse_comm_fix(LAMMPS_NS::Fix*)in comm.o
LAMMPS_NS::Comm::forward_comm_fix(LAMMPS_NS::Fix*)in comm.o
LAMMPS_NS::Comm::reverse_comm_pair(LAMMPS_NS::Pair*)in comm.o
LAMMPS_NS::Comm::forward_comm_pair(LAMMPS_NS::Pair*)in comm.o
LAMMPS_NS::Comm::reverse_comm() in comm.o
LAMMPS_NS::Comm::reverse_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::borders() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
remap_3d(double*, double*, double*, remap_plan_3d*)in remap.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Comm_rank(int, int*)”, referenced from:
LAMMPS_NS::AngleTable::bcast_table(LAMMPS_NS::AngleTable::Table*)in angle_table.o
LAMMPS_NS::AngleTable::coeff(int, int, char**)in angle_table.o
LAMMPS_NS::BondTable::bcast_table(LAMMPS_NS::BondTable::Table*)in bond_table.o
LAMMPS_NS::BondTable::coeff(int, char**)in bond_table.o
LAMMPS_NS::Comm::Comm(LAMMPS_NS::LAMMPS*)in comm.o
LAMMPS_NS::ComputeReduce::ComputeReduce(LAMMPS_NS::LAMMPS*, int, char**)in compute_reduce.o
LAMMPS_NS::DihedralCharmm::compute(int, int)in dihedral_charmm.o
LAMMPS_NS::DihedralHarmonic::compute(int, int)in dihedral_harmonic.o
LAMMPS_NS::DihedralHelix::compute(int, int)in dihedral_helix.o
LAMMPS_NS::Dump::Dump(LAMMPS_NS::LAMMPS*, int, char**)in dump.o
LAMMPS_NS::Error::one(char const*)in error.o
LAMMPS_NS::Error::all(char const*)in error.o
fft_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int*)in fft3d.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)in fix_ave_histo.o
LAMMPS_NS::FixAveSpatial::FixAveSpatial(LAMMPS_NS::LAMMPS*, int, char**)in fix_ave_spatial.o
LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)in fix_ave_time.o
LAMMPS_NS::FixBondBreak::FixBondBreak(LAMMPS_NS::LAMMPS*, int, char**)in fix_bond_break.o
LAMMPS_NS::FixBondCreate::FixBondCreate(LAMMPS_NS::LAMMPS*, int, char**)in fix_bond_create.o
LAMMPS_NS::FixOrientFCC::FixOrientFCC(LAMMPS_NS::LAMMPS*, int, char**)in fix_orient_fcc.o
LAMMPS_NS::FixPrint::FixPrint(LAMMPS_NS::LAMMPS*, int, char**)in fix_print.o
LAMMPS_NS::FixShake::FixShake(LAMMPS_NS::LAMMPS*, int, char**)in fix_shake.o
LAMMPS_NS::FixThermalConductivity::FixThermalConductivity(LAMMPS_NS::LAMMPS*, int, char**)in fix_thermal_conductivity.o
LAMMPS_NS::FixTMD::FixTMD(LAMMPS_NS::LAMMPS*, int, char**)in fix_tmd.o
LAMMPS_NS::FixTTM::FixTTM(LAMMPS_NS::LAMMPS*, int, char**)in fix_ttm.o
LAMMPS_NS::FixViscosity::FixViscosity(LAMMPS_NS::LAMMPS*, int, char**)in fix_viscosity.o
LAMMPS_NS::Group::Group(LAMMPS_NS::LAMMPS*)in group.o
LAMMPS_NS::ImproperCvff::compute(int, int)in improper_cvff.o
LAMMPS_NS::ImproperHarmonic::compute(int, int)in improper_harmonic.o
LAMMPS_NS::Input::Input(LAMMPS_NS::LAMMPS*, int, char**)in input.o
LAMMPS_NS::LAMMPS::LAMMPS(int, char**, int)in lammps.o
LAMMPS_NS::MinHFTN::open_hftn_print_file() in min_hftn.o
LAMMPS_NS::Neighbor::Neighbor(LAMMPS_NS::LAMMPS*)in neighbor.o
LAMMPS_NS::Pair::write_file(int, char**)in pair.o
LAMMPS_NS::PairAIREBO::read_file(char*) in pair_airebo.o
LAMMPS_NS::PairTable::bcast_table(LAMMPS_NS::PairTable::Table*)in pair_table.o
LAMMPS_NS::PairTable::coeff(int, char**)in pair_table.o
LAMMPS_NS::PPPM::PPPM(LAMMPS_NS::LAMMPS*, int, char**)in pppm.o
LAMMPS_NS::ReadData::ReadData(LAMMPS_NS::LAMMPS*)in read_data.o
LAMMPS_NS::ReadRestart::command(int, char**)in read_restart.o
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int)in remap.o
LAMMPS_NS::shell::Shell(LAMMPS_NS::LAMMPS*)in shell.o
LAMMPS_NS::Special::Special(LAMMPS_NS::LAMMPS*)in special.o
LAMMPS_NS::Special::combine() in special.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Thermo::Thermo(LAMMPS_NS::LAMMPS*, int, char**)in thermo.o
LAMMPS_NS::Universe::Universe(LAMMPS_NS::LAMMPS*, int)in universe.o
LAMMPS_NS::Variable::Variable(LAMMPS_NS::LAMMPS*)in variable.o
LAMMPS_NS::WriteRestart::WriteRestart(LAMMPS_NS::LAMMPS*)in write_restart.o
“MPI_Init(int*, char***)”, referenced from:
main in main.o
“MPI_Barrier(int)”, referenced from:
LAMMPS_NS::Comm::irregular_create(int, int*, int*, int*)in comm.o
LAMMPS_NS::Error::all(char const*)in error.o
LAMMPS_NS::Error::universe_all(char const*)in error.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::timer::barrier_stop(int) in timer.o
LAMMPS_NS::timer::barrier_start(int) in timer.o
“MPI_Gather(void*, int, int, void*, int, int, int, int)”, referenced from:
LAMMPS_NS::DumpCFG::create_sorted_tags() in dump_cfg.o
“MPI_Wtime()”, referenced from:
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::PPPM::timing(int, double&, double&)in pppm.o
LAMMPS_NS::timer::elapsed(int) in timer.o
LAMMPS_NS::timer::stamp(int) in timer.o
LAMMPS_NS::timer::stamp() in timer.o
LAMMPS_NS::timer::barrier_stop(int) in timer.o
LAMMPS_NS::timer::barrier_start(int) in timer.o
“MPI_Reduce_scatter(void*, void*, int*, int, int, int)”, referenced from:
LAMMPS_NS::Comm::irregular_create(int, int*, int*, int*)in comm.o
“MPI_Recv(void*, int, int, int, int, int, MPI_Status*)”, referenced from:
LAMMPS_NS::Comm::irregular_create(int, int*, int*, int*)in comm.o
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Reduce(void*, void*, int, int, int, int, int)”, referenced from:
LAMMPS_NS::DumpCFG::write_header(int) in dump_cfg.o
“MPI_Abort(int, int)”, referenced from:
LAMMPS_NS::Error::one(char const*)in error.o
LAMMPS_NS::Error::universe_one(char const*)in error.o
“MPI_Scan(void*, void*, int, int, int, int)”, referenced from:
LAMMPS_NS::atom::tag_extend() in atom.o
LAMMPS_NS::DumpLocal::pack_index(int) in dump_local.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
“MPI_Send(void*, int, int, int, int, int)”, referenced from:
LAMMPS_NS::Comm::irregular_perform(LAMMPS_NS::Comm::Plan*, double*, int*, double*)in comm.o
LAMMPS_NS::Comm::irregular_create(int, int*, int*, int*)in comm.o
LAMMPS_NS::Comm::reverse_comm_compute(LAMMPS_NS::Compute*)in comm.o
LAMMPS_NS::Comm::forward_comm_compute(LAMMPS_NS::Compute*)in comm.o
LAMMPS_NS::Comm::reverse_comm_fix(LAMMPS_NS::Fix*)in comm.o
LAMMPS_NS::Comm::forward_comm_fix(LAMMPS_NS::Fix*)in comm.o
LAMMPS_NS::Comm::reverse_comm_pair(LAMMPS_NS::Pair*)in comm.o
LAMMPS_NS::Comm::forward_comm_pair(LAMMPS_NS::Pair*)in comm.o
LAMMPS_NS::Comm::reverse_comm() in comm.o
LAMMPS_NS::Comm::reverse_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::borders() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
remap_3d(double*, double*, double*, remap_plan_3d*)in remap.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Comm_split(int, int, int, int*)”, referenced from:
LAMMPS_NS::LAMMPS::LAMMPS(int, char**, int)in lammps.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
“MPI_Rsend(void*, int, int, int, int, int)”, referenced from:
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Cart_rank(int, int*, int*)”, referenced from:
LAMMPS_NS::Comm::set_procs() in comm.o
“MPI_Cart_shift(int, int, int, int*, int*)”, referenced from:
LAMMPS_NS::Comm::set_procs() in comm.o
LAMMPS_NS::Comm::set_procs() in comm.o
LAMMPS_NS::Comm::set_procs() in comm.o
“MPI_Wait(int*, MPI_Status*)”, referenced from:
LAMMPS_NS::Comm::reverse_comm_compute(LAMMPS_NS::Compute*)in comm.o
LAMMPS_NS::Comm::forward_comm_compute(LAMMPS_NS::Compute*)in comm.o
LAMMPS_NS::Comm::reverse_comm_fix(LAMMPS_NS::Fix*)in comm.o
LAMMPS_NS::Comm::forward_comm_fix(LAMMPS_NS::Fix*)in comm.o
LAMMPS_NS::Comm::reverse_comm_pair(LAMMPS_NS::Pair*)in comm.o
LAMMPS_NS::Comm::forward_comm_pair(LAMMPS_NS::Pair*)in comm.o
LAMMPS_NS::Comm::reverse_comm() in comm.o
LAMMPS_NS::Comm::reverse_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::forward_comm() in comm.o
LAMMPS_NS::Comm::borders() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::fillbrick() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::PPPM::brick2fft() in pppm.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Allreduce(void*, void*, int, int, int, int)”, referenced from:
LAMMPS_NS::atom::tag_consecutive() in atom.o
LAMMPS_NS::atom::tag_consecutive() in atom.o
LAMMPS_NS::atom::map_init() in atom.o
LAMMPS_NS::atom::tag_extend() in atom.o
LAMMPS_NS::Compute::molecules_in_group(int&, int&)in compute.o
LAMMPS_NS::Compute::molecules_in_group(int&, int&)in compute.o
LAMMPS_NS::Compute::molecules_in_group(int&, int&)in compute.o
LAMMPS_NS::Compute::molecules_in_group(int&, int&)in compute.o
LAMMPS_NS::Compute::molecules_in_group(int&, int&)in compute.o
LAMMPS_NS::ComputeCNAAtom::compute_peratom() in compute_cna_atom.o
LAMMPS_NS::ComputeCNAAtom::compute_peratom() in compute_cna_atom.o
LAMMPS_NS::ComputeCOMMolecule::compute_array() in compute_com_molecule.o
LAMMPS_NS::ComputeCOMMolecule::ComputeCOMMolecule(LAMMPS_NS::LAMMPS*, int, char**)in compute_com_molecule.o
LAMMPS_NS::ComputeERotateSphere::compute_scalar() in compute_erotate_sphere.o
LAMMPS_NS::ComputeGroupGroup::interact() in compute_group_group.o
LAMMPS_NS::ComputeGyrationMolecule::compute_vector() in compute_gyration_molecule.o
LAMMPS_NS::ComputeGyrationMolecule::compute_vector() in compute_gyration_molecule.o
LAMMPS_NS::ComputeGyrationMolecule::ComputeGyrationMolecule(LAMMPS_NS::LAMMPS*, int, char**)in compute_gyration_molecule.o
LAMMPS_NS::ComputeHeatFlux::compute_vector() in compute_heat_flux.o
LAMMPS_NS::ComputeKE::compute_scalar() in compute_ke.o
LAMMPS_NS::ComputeMSD::compute_vector() in compute_msd.o
LAMMPS_NS::ComputeMSD::init() in compute_msd.o
LAMMPS_NS::ComputeMSDMolecule::compute_array() in compute_msd_molecule.o
LAMMPS_NS::ComputeMSDMolecule::ComputeMSDMolecule(LAMMPS_NS::LAMMPS*, int, char**)in compute_msd_molecule.o
LAMMPS_NS::ComputePE::compute_scalar() in compute_pe.o
LAMMPS_NS::ComputePressure::virial_compute(int, int)in compute_pressure.o
LAMMPS_NS::ComputeRDF::compute_array() in compute_rdf.o
LAMMPS_NS::ComputeRDF::init() in compute_rdf.o
LAMMPS_NS::ComputeRDF::init() in compute_rdf.o
LAMMPS_NS::ComputeReduce::count(int) in compute_reduce.o
LAMMPS_NS::ComputeReduce::count(int) in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_scalar() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_scalar() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_scalar() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_scalar() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduce::compute_vector() in compute_reduce.o
LAMMPS_NS::ComputeReduceRegion::count(int) in compute_reduce_region.o
LAMMPS_NS::ComputeReduceRegion::count(int) in compute_reduce_region.o
LAMMPS_NS::ComputeTemp::compute_vector() in compute_temp.o
LAMMPS_NS::ComputeTemp::compute_scalar() in compute_temp.o
LAMMPS_NS::ComputeTempCOM::compute_vector() in compute_temp_com.o
LAMMPS_NS::ComputeTempCOM::compute_scalar() in compute_temp_com.o
LAMMPS_NS::ComputeTempDeform::compute_vector() in compute_temp_deform.o
LAMMPS_NS::ComputeTempDeform::compute_scalar() in compute_temp_deform.o
LAMMPS_NS::ComputeTempPartial::compute_vector() in compute_temp_partial.o
LAMMPS_NS::ComputeTempPartial::compute_scalar() in compute_temp_partial.o
LAMMPS_NS::ComputeTempProfile::bin_average() in compute_temp_profile.o
LAMMPS_NS::ComputeTempProfile::compute_vector() in compute_temp_profile.o
LAMMPS_NS::ComputeTempProfile::compute_scalar() in compute_temp_profile.o
LAMMPS_NS::ComputeTempRamp::compute_vector() in compute_temp_ramp.o
LAMMPS_NS::ComputeTempRamp::compute_scalar() in compute_temp_ramp.o
LAMMPS_NS::ComputeTempRegion::compute_vector() in compute_temp_region.o
LAMMPS_NS::ComputeTempRegion::compute_scalar() in compute_temp_region.o
LAMMPS_NS::ComputeTempSphere::compute_vector() in compute_temp_sphere.o
LAMMPS_NS::ComputeTempSphere::dof_compute() in compute_temp_sphere.o
LAMMPS_NS::ComputeTempSphere::dof_compute() in compute_temp_sphere.o
LAMMPS_NS::ComputeTempSphere::compute_scalar() in compute_temp_sphere.o
LAMMPS_NS::CreateAtoms::command(int, char**)in create_atoms.o
LAMMPS_NS::DeleteAtoms::command(int, char**)in delete_atoms.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DeleteBonds::command(int, char**)in delete_bonds.o
LAMMPS_NS::DisplaceAtoms::command(int, char**)in displace_atoms.o
LAMMPS_NS::DisplaceBox::command(int, char**)in displace_box.o
LAMMPS_NS::Domain::reset_box() in domain.o
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::Dump::write() in dump.o
LAMMPS_NS::Ewald::slabcorr(int) in ewald.o
LAMMPS_NS::Ewald::compute(int, int)in ewald.o
LAMMPS_NS::Ewald::compute(int, int)in ewald.o
LAMMPS_NS::Ewald::init() in ewald.o
LAMMPS_NS::Ewald::init() in ewald.o
fft_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int*)in fft3d.o
fft_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int*)in fft3d.o
fft_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int*)in fft3d.o
LAMMPS_NS::Finish::stats(int, double*, double*, double*, double*, int, int*)in finish.o
LAMMPS_NS::Finish::stats(int, double*, double*, double*, double*, int, int*)in finish.o
LAMMPS_NS::Finish::stats(int, double*, double*, double*, double*, int, int*)in finish.o
LAMMPS_NS::Finish::stats(int, double*, double*, double*, double*, int, int*)in finish.o
LAMMPS_NS::Finish::stats(int, double*, double*, double*, double*, int, int*)in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::Finish::end(int) in finish.o
LAMMPS_NS::FixAddForce::compute_vector(int) in fix_addforce.o
LAMMPS_NS::FixAddForce::compute_scalar() in fix_addforce.o
LAMMPS_NS::FixAveHisto::end_of_step() in fix_ave_histo.o
LAMMPS_NS::FixAveHisto::end_of_step() in fix_ave_histo.o
LAMMPS_NS::FixAveHisto::end_of_step() in fix_ave_histo.o
LAMMPS_NS::FixAveHisto::end_of_step() in fix_ave_histo.o
LAMMPS_NS::FixAveSpatial::end_of_step() in fix_ave_spatial.o
LAMMPS_NS::FixAveSpatial::end_of_step() in fix_ave_spatial.o
LAMMPS_NS::FixAveSpatial::end_of_step() in fix_ave_spatial.o
LAMMPS_NS::FixAveSpatial::end_of_step() in fix_ave_spatial.o
LAMMPS_NS::FixAveForce::post_force_respa(int, int, int)in fix_aveforce.o
LAMMPS_NS::FixAveForce::post_force(int) in fix_aveforce.o
LAMMPS_NS::FixBondBreak::post_integrate() in fix_bond_break.o
LAMMPS_NS::FixBondCreate::post_integrate() in fix_bond_create.o
LAMMPS_NS::FixBondSwap::compute_vector(int) in fix_bond_swap.o
LAMMPS_NS::FixDeposit::pre_exchange() in fix_deposit.o
LAMMPS_NS::FixDeposit::pre_exchange() in fix_deposit.o
LAMMPS_NS::FixDeposit::pre_exchange() in fix_deposit.o
LAMMPS_NS::FixDrag::compute_vector(int) in fix_drag.o
LAMMPS_NS::FixDtReset::end_of_step() in fix_dt_reset.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::pre_exchange() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::init() in fix_evaporate.o
LAMMPS_NS::FixEvaporate::init() in fix_evaporate.o
LAMMPS_NS::FixIndent::compute_vector(int) in fix_indent.o
LAMMPS_NS::FixIndent::compute_scalar() in fix_indent.o
LAMMPS_NS::FixLangevin::compute_scalar() in fix_langevin.o
LAMMPS_NS::FixNVELimit::compute_scalar() in fix_nve_limit.o
LAMMPS_NS::FixOrientFCC::compute_scalar() in fix_orient_fcc.o
LAMMPS_NS::FixOrientFCC::post_force(int) in fix_orient_fcc.o
LAMMPS_NS::FixOrientFCC::post_force(int) in fix_orient_fcc.o
LAMMPS_NS::FixOrientFCC::post_force(int) in fix_orient_fcc.o
LAMMPS_NS::FixRigid::final_integrate() in fix_rigid.o
LAMMPS_NS::FixRigid::dof(int) in fix_rigid.o
LAMMPS_NS::FixRigid::dof(int) in fix_rigid.o
LAMMPS_NS::FixRigid::setup(int) in fix_rigid.o
LAMMPS_NS::FixRigid::setup(int) in fix_rigid.o
LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)in fix_rigid.o
LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)in fix_rigid.o
LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)in fix_rigid.o
LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)in fix_rigid.o
LAMMPS_NS::FixRigid::init() in fix_rigid.o
LAMMPS_NS::FixRigid::init() in fix_rigid.o
LAMMPS_NS::FixRigid::init() in fix_rigid.o
LAMMPS_NS::FixRigid::init() in fix_rigid.o
LAMMPS_NS::FixRigidNVE::final_integrate() in fix_rigid_nve.o
LAMMPS_NS::FixRigidNVT::final_integrate() in fix_rigid_nvt.o
LAMMPS_NS::FixSetForce::compute_vector(int) in fix_setforce.o
LAMMPS_NS::FixShake::dof(int) in fix_shake.o
LAMMPS_NS::FixShake::init() in fix_shake.o
LAMMPS_NS::FixShake::init() in fix_shake.o
LAMMPS_NS::FixShake::init() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::stats() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShake::find_clusters() in fix_shake.o
LAMMPS_NS::FixShearHistory::pre_exchange() in fix_shear_history.o
LAMMPS_NS::FixSpringSelf::compute_scalar() in fix_spring_self.o
LAMMPS_NS::FixThermalConductivity::end_of_step() in fix_thermal_conductivity.o
LAMMPS_NS::FixTMD::readfile(char*)in fix_tmd.o
LAMMPS_NS::FixTMD::initial_integrate(int) in fix_tmd.o
LAMMPS_NS::FixTMD::initial_integrate(int) in fix_tmd.o
LAMMPS_NS::FixTMD::FixTMD(LAMMPS_NS::LAMMPS*, int, char**)in fix_tmd.o
LAMMPS_NS::FixTTM::end_of_step() in fix_ttm.o
LAMMPS_NS::FixTTM::end_of_step() in fix_ttm.o
LAMMPS_NS::FixTTM::end_of_step() in fix_ttm.o
LAMMPS_NS::FixTTM::end_of_step() in fix_ttm.o
LAMMPS_NS::FixViscosity::end_of_step() in fix_viscosity.o
LAMMPS_NS::FixViscosity::end_of_step() in fix_viscosity.o
LAMMPS_NS::FixWall::compute_vector(int) in fix_wall.o
LAMMPS_NS::FixWall::compute_scalar() in fix_wall.o
LAMMPS_NS::FixWallRegion::compute_vector(int) in fix_wall_region.o
LAMMPS_NS::FixWallRegion::compute_scalar() in fix_wall_region.o
LAMMPS_NS::FixWallRegion::init() in fix_wall_region.o
LAMMPS_NS::Group::inertia(int, double*, double () [3], int)in group.o
LAMMPS_NS::Group::inertia(int, double, double () [3])in group.o
LAMMPS_NS::Group::angmom(int, double, double*, int)in group.o
LAMMPS_NS::Group::angmom(int, double*, double*)in group.o
LAMMPS_NS::Group::ke(int, int)in group.o
LAMMPS_NS::Group::ke(int) in group.o
LAMMPS_NS::Group::fcm(int, double*, int)in group.o
LAMMPS_NS::Group::fcm(int, double*)in group.o
LAMMPS_NS::Group::vcm(int, double, double*, int)in group.o
LAMMPS_NS::Group::vcm(int, double, double*)in group.o
LAMMPS_NS::Group::xcm(int, double, double*, int)in group.o
LAMMPS_NS::Group::xcm(int, double, double*)in group.o
LAMMPS_NS::Group::bounds(int, double*, int)in group.o
LAMMPS_NS::Group::bounds(int, double*)in group.o
LAMMPS_NS::Group::charge(int, int)in group.o
LAMMPS_NS::Group::charge(int) in group.o
LAMMPS_NS::Group::mass(int, int)in group.o
LAMMPS_NS::Group::mass(int) in group.o
LAMMPS_NS::Group::count(int, int)in group.o
LAMMPS_NS::Group::count(int) in group.o
LAMMPS_NS::Group::gyration(int, double, double*, int)in group.o
LAMMPS_NS::Group::gyration(int, double, double*)in group.o
LAMMPS_NS::Group::assign(int, char**)in group.o
lammps_get_coords in library.o
LAMMPS_NS::Min::fnorm_inf() in min.o
LAMMPS_NS::Min::fnorm_sqr() in min.o
LAMMPS_NS::Min::setup() in min.o
LAMMPS_NS::MinCG::iterate(int) in min_cg.o
LAMMPS_NS::MinCG::iterate(int) in min_cg.o
LAMMPS_NS::MinHFTN::calc_ppnew_pdold_using_mpi(double&, double&) constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_dhd_dd_using_mpi(double&, double&) constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_grad_dot_v_using_mpi(int) constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_dot_prod_using_mpi(int, int) constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_xinf_using_mpi() constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_xinf_using_mpi() constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_plengths_using_mpi(double&, double&) constin min_hftn.o
LAMMPS_NS::MinHFTN::calc_plengths_using_mpi(double&, double&) constin min_hftn.o
LAMMPS_NS::MinHFTN::evaluate_dir_der(bool, int, int, bool, double&)in min_hftn.o
LAMMPS_NS::MinHFTN::step_exceeds_DMAX() constin min_hftn.o
LAMMPS_NS::MinHFTN::step_exceeds_DMAX() constin min_hftn.o
LAMMPS_NS::MinHFTN::execute_hftn(bool, double, double, double&, double&)in min_hftn.o
LAMMPS_NS::MinLineSearch::linemin_quadratic(double, double&)in min_linesearch.o
LAMMPS_NS::MinLineSearch::linemin_quadratic(double, double&)in min_linesearch.o
LAMMPS_NS::MinLineSearch::linemin_quadratic(double, double&)in min_linesearch.o
LAMMPS_NS::MinLineSearch::linemin_quadratic(double, double&)in min_linesearch.o
LAMMPS_NS::MinLineSearch::linemin_backtrack(double, double&)in min_linesearch.o
LAMMPS_NS::MinLineSearch::linemin_backtrack(double, double&)in min_linesearch.o
LAMMPS_NS::MinLineSearch::linemin_backtrack(double, double&)in min_linesearch.o
LAMMPS_NS::Modify::init() in modify.o
LAMMPS_NS::Neighbor::check_distance() in neighbor.o
LAMMPS_NS::PairLJ96Cut::init_one(int, int)in pair_lj96_cut.o
LAMMPS_NS::PairLJCut::init_one(int, int)in pair_lj_cut.o
LAMMPS_NS::PairLJCutCoulCut::init_one(int, int)in pair_lj_cut_coul_cut.o
LAMMPS_NS::PairLJCutCoulLong::init_one(int, int)in pair_lj_cut_coul_long.o
LAMMPS_NS::PairLJExpand::init_one(int, int)in pair_lj_expand.o
LAMMPS_NS::PPPM::slabcorr(int) in pppm.o
LAMMPS_NS::PPPM::particle_map() in pppm.o
LAMMPS_NS::PPPM::compute(int, int)in pppm.o
LAMMPS_NS::PPPM::compute(int, int)in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPMTIP4P::particle_map() in pppm_tip4p.o
LAMMPS_NS::ReadData::impropers() in read_data.o
LAMMPS_NS::ReadData::dihedrals() in read_data.o
LAMMPS_NS::ReadData::angles() in read_data.o
LAMMPS_NS::ReadData::bonds() in read_data.o
LAMMPS_NS::ReadData::atoms() in read_data.o
LAMMPS_NS::ReadData::atoms() in read_data.o
LAMMPS_NS::ReadData::atoms() in read_data.o
LAMMPS_NS::ReadData::atoms() in read_data.o
LAMMPS_NS::ReadRestart::command(int, char**)in read_restart.o
LAMMPS_NS::ReadRestart::command(int, char**)in read_restart.o
LAMMPS_NS::Replicate::command(int, char**)in replicate.o
LAMMPS_NS::Replicate::command(int, char**)in replicate.o
LAMMPS_NS::Replicate::command(int, char**)in replicate.o
LAMMPS_NS::Replicate::command(int, char**)in replicate.o
LAMMPS_NS::Set::command(int, char**)in set.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::dihedral_trim() in special.o
LAMMPS_NS::Special::combine() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Special::build() in special.o
LAMMPS_NS::Thermo::compute_fmax() in thermo.o
LAMMPS_NS::Thermo::compute_emol() in thermo.o
LAMMPS_NS::Thermo::compute_eimp() in thermo.o
LAMMPS_NS::Thermo::compute_edihed() in thermo.o
LAMMPS_NS::Thermo::compute_eangle() in thermo.o
LAMMPS_NS::Thermo::compute_ebond() in thermo.o
LAMMPS_NS::Thermo::compute_epair() in thermo.o
LAMMPS_NS::Thermo::compute_ecoul() in thermo.o
LAMMPS_NS::Thermo::compute_evdwl() in thermo.o
LAMMPS_NS::Thermo::compute_fnorm() in thermo.o
LAMMPS_NS::Thermo::lost_check() in thermo.o
LAMMPS_NS::Variable::peratom2global(int, char*, double*, int, int, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&)in variable.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
LAMMPS_NS::WriteRestart::write(char*) in write_restart.o
“MPI_Sendrecv(void*, int, int, int, int, void*, int, int, int, int, int, MPI_Status*)”, referenced from:
LAMMPS_NS::Comm::borders() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::Comm::exchange() in comm.o
LAMMPS_NS::FixThermalConductivity::end_of_step() in fix_thermal_conductivity.o
LAMMPS_NS::FixThermalConductivity::end_of_step() in fix_thermal_conductivity.o
LAMMPS_NS::FixViscosity::end_of_step() in fix_viscosity.o
LAMMPS_NS::FixViscosity::end_of_step() in fix_viscosity.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
LAMMPS_NS::PPPM::init() in pppm.o
“MPI_Cart_get(int, int, int*, int*, int*)”, referenced from:
LAMMPS_NS::Comm::set_procs() in comm.o
“MPI_Allgather(void*, int, int, void*, int, int, int)”, referenced from:
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int)in remap.o
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int, int)in remap.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[1]: *** […/lmp_mac] Error 1
make: *** [mac] Error 2
dhcp166:src swayamj$

How can I resolve this issue?

4

The following symbols are not found.

[...]

"MPI_Cart_get(int, int, int*, int*, int*)", referenced from:
LAMMPS_NS::Comm::set_procs() in comm.o
"MPI_Allgather(void*, int, int, void*, int, int, int)", referenced from:
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int,
int, int, int, int, int, int, int)in remap.o
remap_3d_create_plan(int, int, int, int, int, int, int, int, int, int,
int, int, int, int, int, int, int)in remap.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
LAMMPS_NS::Temper::command(int, char**)in temper.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[1]: *** [../lmp_mac] Error 1
make: *** [mac] Error 2
dhcp166:src swayamj$

How can I resolve this issue?

those are all MPI symbols. find out how to compile and
link an MPI program correctly on your OS and then adjust
the file MAKE/Makefile.mac accordingly.

as suspected, this is not a LAMMPS issue.

cheers,
   axel.

5

I have linked the mpi.h in the STUBS while trying to install in my MAC system and I think I have got the Makefile.mac also right. I use “make mac” while building in the src directory.

/home/sj/lammps/src/MAKE
/home/sj/lammps/src/STUBS

Could you please tell me what is wrong with the Makefile.mac for which I am getting this error of “symbols not found, ld returned 1 exit status”.

I have included the file here,

# mac = Apple PowerBook G4 laptop, c++, Intel ifort, no MPI, FFTW 2.1.5

SHELL = /bin/sh

# ---------------------------------------------------------------------
# compiler/linker settings
# specify flags and libraries needed for your compiler

CC = c++
CCFLAGS = -O
DEPFLAGS = -M
LINK = c++
LINKFLAGS = -O
LIB =
ARCHIVE = ar
ARFLAGS = -rc
SIZE = size

# ---------------------------------------------------------------------
# LAMMPS-specific settings
# specify settings for LAMMPS features you will use

# LAMMPS ifdef options, see doc/Section_start.html

LMP_INC = -DLAMMPS_GZIP

# MPI library, can be src/STUBS dummy lib
# INC = path for mpi.h, MPI compiler settings
# PATH = path for MPI library
# LIB = name of MPI library

MPI_INC = -I…/STUBS
MPI_PATH = -L…/STUBS
MPI_LIB = -lmpi

# FFT library, can be -DFFT_NONE if not using PPPM from KSPACE package
# INC = -DFFT_FFTW, -DFFT_INTEL, -DFFT_NONE, etc, FFT compiler settings
# PATH = path for FFT library
# LIB = name of FFT library

FFT_INC = -DFFT_NONE
FFT_PATH =
FFT_LIB =

# additional system libraries needed by LAMMPS package libraries
# these settings are IGNORED if the corresponding LAMMPS package
# (e.g. gpu, meam) is NOT included in the LAMMPS build
# SYSLIB = names of libraries
# SYSPATH = paths of libraries

gpu_SYSLIB = -lcudart
meam_SYSLIB = -lifcore -lsvml -lompstub -limf
reax_SYSLIB = -lifcore -lsvml -lompstub -limf
user-atc_SYSLIB = -lblas -llapack

gpu_SYSPATH = -L/usr/local/cuda/lib64
meam_SYSPATH = -L/opt/intel/fce/10.0.023/lib
reax_SYSPATH = -L/opt/intel/fce/10.0.023/lib
user-atc_SYSPATH =

# ---------------------------------------------------------------------
# build rules and dependencies
# no need to edit this section

include Makefile.package

EXTRA_INC = (LMP_INC) (PKG_INC) (MPI_INC) (FFT_INC)
EXTRA_PATH = (PKG_PATH) (MPI_PATH) (FFT_PATH) (PKG_SYSPATH)
EXTRA_LIB = (PKG_LIB) (MPI_LIB) (FFT_LIB) (PKG_SYSLIB)

# Link target

(EXE): (OBJ)
(LINK) (LINKFLAGS) (EXTRA_PATH) (OBJ) (EXTRA_LIB) (LIB) -o (EXE)** **(SIZE) $(EXE)

# Library target

lib: (OBJ)** **(ARCHIVE) (ARFLAGS) (EXE) $(OBJ)

# Compilation rules

.o:.cpp
(CC) (CCFLAGS) (EXTRA_INC) -c <

.d:.cpp
(CC) (CCFLAGS) (EXTRA_INC) (DEPFLAGS) < > @

# Individual dependencies

DEPENDS = (OBJ:.o=.d)** **include (DEPENDS)

Best Regards

6

a) did you build the dummy MPI lib in STUBS? If not, you cannot
link against it.

b) Try replacing this line
MPI_LIB = -lmpi
with
MPI_LIB = ../STUBS/libmpi.a

Sometimes if there is an MPI installed on your system already, you
will link against it by accident. Macs seems particularly bad at this.

Steve

7

Yes, I had built the dummy MPI lib in STUBS.

But, as you pointed out, the problem was because there was a MPI already installed in the MAC system which I was working on. Instead of trying it out with STUBS, I linked to the existing MPI library and built with the “make mac_mpi” command. It worked fine.

Thank you.