Hi,
I am using LAMMPS for my work.
I tried to install plumed as specified in manual.
It worked. But when i tried to compile the lammps executable,
it showed me an error which is as follows.
Makefile:93: biasexchange.d: No such file or directory
Makefile:93: fix_plumed.d: No such file or directory
Makefile:93: hills.d: No such file or directory
Makefile:93: metadyn.d: No such file or directory
Makefile:93: modify.d: No such file or directory
Makefile:93: ptmetad.d: No such file or directory
Makefile:93: read_restraint.d: No such file or directory
Makefile:93: restraint_alfabeta.d: No such file or directory
Makefile:93: restraint_alpharmsd.d: No such file or directory
Makefile:93: restraint_angle.d: No such file or directory
Makefile:93: restraint_antibetarmsd.d: No such file or directory
Makefile:93: restraint_coord.d: No such file or directory
Makefile:93: restraint.d: No such file or directory
Makefile:93: restraint_dihcor.d: No such file or directory
Makefile:93: restraint_dipole.d: No such file or directory
Makefile:93: restraint_dist.d: No such file or directory
Makefile:93: restraint_elstpot.d: No such file or directory
Makefile:93: restraint_energy.d: No such file or directory
Makefile:93: restraint_hbonds.d: No such file or directory
Makefile:93: restraint_helix.d: No such file or directory
Makefile:93: restraint_mindist.d: No such file or directory
Makefile:93: restraint_parabetarmsd.d: No such file or directory
Makefile:93: restraint_position.d: No such file or directory
Makefile:93: restraint_puckering.d: No such file or directory
Makefile:93: restraint_rgyr.d: No such file or directory
Makefile:93: restraint_rmsdtor.d: No such file or directory
Makefile:93: restraint_spath.d: No such file or directory
Makefile:93: restraint_torsion.d: No such file or directory
Makefile:93: restraint_waterbridge.d: No such file or directory
Makefile:93: restraint_zpath.d: No such file or directory
Makefile:93: testderivatives.d: No such file or directory
icc -DLAMMPS_PLUMED -O -DLAMMPS_GZIP -I/opt/openmpi/prefix/include
-DFFT_FFTW -M testderivatives.cpp > testderivatives.d
/bin/sh: icc: command not found
make[1]: *** [testderivatives.d] Error 127
make[1]: Leaving directory
`/home/accelrys/other_downloads/lammps/lammps-18Jan11/src/Obj_lin'
make: *** [lin] Error 2
Could you kindly help me resolve this issue.
Thanks in advance
Sincerely
Loganathan
Hi,
I am using LAMMPS for my work.
I tried to install plumed as specified in manual.
It worked. But when i tried to compile the lammps executable,
it showed me an error which is as follows.
Makefile:93: biasexchange.d: No such file or directory
Makefile:93: fix_plumed.d: No such file or directory
Makefile:93: hills.d: No such file or directory
Makefile:93: metadyn.d: No such file or directory
Makefile:93: modify.d: No such file or directory
Makefile:93: ptmetad.d: No such file or directory
Makefile:93: read_restraint.d: No such file or directory
Makefile:93: restraint_alfabeta.d: No such file or directory
Makefile:93: restraint_alpharmsd.d: No such file or directory
Makefile:93: restraint_angle.d: No such file or directory
Makefile:93: restraint_antibetarmsd.d: No such file or directory
Makefile:93: restraint_coord.d: No such file or directory
Makefile:93: restraint.d: No such file or directory
Makefile:93: restraint_dihcor.d: No such file or directory
Makefile:93: restraint_dipole.d: No such file or directory
Makefile:93: restraint_dist.d: No such file or directory
Makefile:93: restraint_elstpot.d: No such file or directory
Makefile:93: restraint_energy.d: No such file or directory
Makefile:93: restraint_hbonds.d: No such file or directory
Makefile:93: restraint_helix.d: No such file or directory
Makefile:93: restraint_mindist.d: No such file or directory
Makefile:93: restraint_parabetarmsd.d: No such file or directory
Makefile:93: restraint_position.d: No such file or directory
Makefile:93: restraint_puckering.d: No such file or directory
Makefile:93: restraint_rgyr.d: No such file or directory
Makefile:93: restraint_rmsdtor.d: No such file or directory
Makefile:93: restraint_spath.d: No such file or directory
Makefile:93: restraint_torsion.d: No such file or directory
Makefile:93: restraint_waterbridge.d: No such file or directory
Makefile:93: restraint_zpath.d: No such file or directory
Makefile:93: testderivatives.d: No such file or directory
icc -DLAMMPS_PLUMED -O -DLAMMPS_GZIP -I/opt/openmpi/prefix/include
-DFFT_FFTW -M testderivatives.cpp > testderivatives.d
/bin/sh: icc: command not found
make[1]: *** [testderivatives.d] Error 127
make[1]: Leaving directory
`/home/accelrys/other_downloads/lammps/lammps-18Jan11/src/Obj_lin'
make: *** [lin] Error 2
Could you kindly help me resolve this issue.
please contact the plumed developers.
somehow you are calling the intel c compiler,
but don't have it installed.
not a LAMMPS issue.
axel.
ps: LAMMPS now ships with an integrated metadynamics
module using the colvars library code from NAMD.
axel.