Hi All,
I am trying to equilibrate a system of SWM4-NDP water and polarizable NaCl using the drude package. Even at timestep of 0.01 fs, I still get bond atoms missing between chlorine and its drude atom. Apparently, this is a problem that has been discussed here once in an old thread; something that may (or may not) have to do with overpolarization.
I have used bond_style table for chlorine as someone suggested in the thread. Still, doesn’t work. In fact, I got the table file from these researchers who had done the same simulation in LAMMPS and were somehow able to get it to be stable at 0.5 fs. Unfortunately, I can’t reproduce the work. I have used aggressive damping parameters in the NVT command since the temperature rapidly increases just before it crashes. I actually don’t know what else to try and need help with suggestions. Thank you very much!
I have attached the relevant files to this post for your perusal. Thanks once again.
Cl_bond_2A.dat (137.4 KB)
data.water+nacl-from-restart-run4 (4.1 MB)
in.equil-run5 (1.7 KB)
NaCl_SWM4_ndp.settings (516 Bytes)